RNA–Protein interactions for RNA: ENST00000578357.5

CUEDC1-208, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-208ENST00000578357 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 SMARCA5O60264 1052 aaPredicted RBP11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 ACRP10323 421 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 IGFBP4P22692 258 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 FAM126BQ8IXS8 530 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 CHST13Q8NET6 341 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 IL27Q8NEV9 243 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 SEZ6LQ9BYH1 1024 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 TSPYL2Q9H2G4 693 aaPredicted RBP11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 SLC28A3Q9HAS3 691 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 ZNF287Q9HBT7 754 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 IL23AQ9NPF7 189 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 THEGQ9P2T0 379 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 FEM1BQ9UK73 627 aa11.95□□□□□ -0.5
CUEDC1-208ENST00000578357 BAZ2AQ9UIF9 1905 aaKnown RBP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 CABYRO75952 493 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 NDUFB10O96000 172 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 OAZ1P54368 228 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 CCDC85BQ15834 202 aaPredicted RBP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 SBK1Q52WX2 424 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 GIMAP6Q6P9H5 292 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 NOL8Q76FK4 1167 aaKnown RBP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 HERVK_113Q902F9 699 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 MKL1Q969V6 931 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 PUS7LQ9H0K6 701 aaKnown RBP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 SLC38A10Q9HBR0 1119 aa11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 RAVER2Q9HCJ3 691 aaKnown RBP11.94□□□□□ -0.5
CUEDC1-208ENST00000578357 MINDY4BA8MYZ0 360 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 ZEB2O60315 1214 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 CD4P01730 458 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 FDX1P10109 184 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 RASA1P20936 1047 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 CYP2C18P33260 490 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 NKX3-2P78367 333 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 ARMCX2Q7L311 632 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 CCDC144CPQ8IYA2 1237 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 RPUSD2Q8IZ73 545 aaKnown RBP11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 ADAMTS19Q8TE59 1207 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 STRBPQ96SI9 672 aaKnown RBP11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 SYNPO2Q9UMS6 1093 aa11.93□□□□□ -0.5
CUEDC1-208ENST00000578357 BDP1A6H8Y1 2624 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 ASB14A6NK59 587 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 ADCY6O43306 1168 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 CHGBP05060 677 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 RRP1P56182 461 aaKnown RBP11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 ADGRE1Q14246 886 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 CXCL17Q6UXB2 119 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 STK11IPQ8N1F8 1099 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 UHRF1Q96T88 793 aaPredicted RBP11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 AP5M1Q9H0R1 490 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 HIPK3Q9H422 1215 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 CHMP4BQ9H444 224 aaKnown RBP11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 MYH8P13535 1937 aa11.92□□□□□ -0.5
CUEDC1-208ENST00000578357 GSG1L2A8MUP6 293 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 CTAGE5O15320 804 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 BEX3Q00994 111 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 ITGA7Q13683 1181 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 TSHZ3Q63HK5 1081 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 OTOP2Q7RTS6 562 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 CHURC1Q8WUH1 139 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 FGD4Q96M96 766 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 CRBNQ96SW2 442 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 NKX2-4Q9H2Z4 354 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 MTMR4Q9NYA4 1195 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 CXXC1Q9P0U4 656 aaPredicted RBP11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 SLC4A7Q9Y6M7 1214 aa11.91□□□□□ -0.5
CUEDC1-208ENST00000578357 IGKV6D-41A0A0C4DH26 115 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 DYNC1LI2O43237 492 aaPredicted RBP11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 TTLL1O95922 423 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 APPP05067 770 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 BMP3P12645 472 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 GNAT2P19087 354 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 CNTN2Q02246 1040 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 FSCN1Q16658 493 aaKnown RBP11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 AAK1Q2M2I8 961 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 IQSEC1Q6DN90 963 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 FAM133AQ8N9E0 248 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 LRRCC1Q9C099 1032 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 KATNBL1Q9H079 304 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 ACAD9Q9H845 621 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 HOMER2Q9NSB8 354 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 PLXNA1Q9UIW2 1896 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 GNEQ9Y223 722 aaKnown RBP11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 Q9Y3F1 56 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 PCDHB15Q9Y5E8 787 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 NCOR1O75376 2440 aa11.9□□□□□ -0.5
CUEDC1-208ENST00000578357 CHD9Q3L8U1 2897 aa11.89□□□□□ -0.51
CUEDC1-208ENST00000578357 COL11A1P12107 1806 aaPredicted RBP11.89□□□□□ -0.51
CUEDC1-208ENST00000578357 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.89□□□□□ -0.51
CUEDC1-208ENST00000578357 TMEM232C9JQI7 657 aa11.89□□□□□ -0.51
CUEDC1-208ENST00000578357 SUPT20HL2P0C7V6 817 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms