RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 SH3GLB2Q9NR46 395 aa12.91□□□□□ -0.34
GGA3-205ENST00000578348 COBLO75128 1261 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 CALML3P27482 149 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 NLRP5P59047 1200 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 ZNF174Q15697 407 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 NOM1Q5C9Z4 860 aaKnown RBP12.9□□□□□ -0.34
GGA3-205ENST00000578348 NEDD1Q8NHV4 660 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 GOLGA1Q92805 767 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 EYA3Q99504 573 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 LZTS2Q9BRK4 669 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
GGA3-205ENST00000578348 TRAPPC10P48553 1259 aa12.9□□□□□ -0.35
GGA3-205ENST00000578348 FAM193AP78312 1265 aa12.9□□□□□ -0.35
GGA3-205ENST00000578348 DPYDQ12882 1025 aa12.9□□□□□ -0.35
GGA3-205ENST00000578348 ARFGAP3Q9NP61 516 aa12.9□□□□□ -0.35
GGA3-205ENST00000578348 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.35
GGA3-205ENST00000578348 CASP14P31944 242 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 CYP2C19P33261 490 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 FILIP1LQ4L180 1135 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 TTC38Q5R3I4 469 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 CDKAL1Q5VV42 579 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 SH3RF1Q7Z6J0 888 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 CREBRFQ8IUR6 639 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 RABGGTAQ92696 567 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 FERMT2Q96AC1 680 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 GSDMAQ96QA5 445 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 CTAGE1Q96RT6 745 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 NAA15Q9BXJ9 866 aaKnown RBP12.89□□□□□ -0.35
GGA3-205ENST00000578348 MAD2L2Q9UI95 211 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 CTNND2Q9UQB3 1225 aa12.89□□□□□ -0.35
GGA3-205ENST00000578348 PPP1R3GB7ZBB8 358 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 KIF5CO60282 957 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 MFAP3LO75121 409 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 CCT6AP40227 531 aaKnown RBP12.88□□□□□ -0.35
GGA3-205ENST00000578348 PBX1P40424 430 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 PLIN4Q96Q06 1357 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 PALM3A6NDB9 673 aaPredicted RBP12.88□□□□□ -0.35
GGA3-205ENST00000578348 RXRBP28702 533 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
GGA3-205ENST00000578348 CT47A1Q5JQC4 288 aaPredicted RBP12.88□□□□□ -0.35
GGA3-205ENST00000578348 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 CERS5Q8N5B7 392 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 ZCCHC17Q9NP64 241 aaKnown RBP12.88□□□□□ -0.35
GGA3-205ENST00000578348 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
GGA3-205ENST00000578348 STX8Q9UNK0 236 aa12.88□□□□□ -0.35
GGA3-205ENST00000578348 GYPCP04921 128 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 TXLNAP40222 546 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 NOVP48745 357 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
GGA3-205ENST00000578348 CHMP4BP1P59074 171 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 PTGDRQ13258 359 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
GGA3-205ENST00000578348 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 GALNT17Q6IS24 598 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 STYK1Q6J9G0 422 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
GGA3-205ENST00000578348 G3V3G9 751 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 BLIDQ8IZY5 108 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 CCDC148Q8NFR7 591 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 IPO4Q8TEX9 1081 aaKnown RBP12.87□□□□□ -0.35
GGA3-205ENST00000578348 SPZ1Q9BXG8 430 aa12.87□□□□□ -0.35
GGA3-205ENST00000578348 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.87□□□□□ -0.35
GGA3-205ENST00000578348 ATP2C1P98194 919 aaPredicted RBP12.86□□□□□ -0.35
GGA3-205ENST00000578348 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 RRAGBQ5VZM2 374 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 MSL1Q68DK7 614 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 SRGAP1Q7Z6B7 1085 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 DAGLBQ8NCG7 672 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 ACRBPQ8NEB7 543 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 FUT8Q9BYC5 575 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 UBXN6Q9BZV1 441 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 PCDHA4Q9UN74 947 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 N4BP3O15049 544 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 GABPAQ06546 454 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 KRT31Q15323 416 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 PIK3AP1Q6ZUJ8 805 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 ZNF622Q969S3 477 aaKnown RBP eCLIP12.86□□□□□ -0.357e-7■■□□□ 12.1
GGA3-205ENST00000578348 VPS16Q9H269 839 aa12.86□□□□□ -0.35
GGA3-205ENST00000578348 ADAMTSL1Q8N6G6 1762 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 MYH8P13535 1937 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 F8W031 263 aaPredicted RBP12.85□□□□□ -0.35
GGA3-205ENST00000578348 PARP1P09874 1014 aaKnown RBP12.85□□□□□ -0.35
GGA3-205ENST00000578348 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
GGA3-205ENST00000578348 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 CDC25AP30304 524 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 MCM7P33993 719 aa12.85□□□□□ -0.35
GGA3-205ENST00000578348 FKBP1AP62942 108 aaKnown RBP12.85□□□□□ -0.35
GGA3-205ENST00000578348 SLC20A2Q08357 652 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms