RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
VAPA-204ENST00000577901 CCDC136Q96JN2 1154 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 TSEN34Q9BSV6 310 aaKnown RBP18.96■□□□□ 0.63
VAPA-204ENST00000577901 FAM184BQ9ULE4 1060 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 CCDC171Q6TFL3 1326 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 SYNRGQ9UMZ2 1314 aa18.96■□□□□ 0.63
VAPA-204ENST00000577901 DNAJC25-GNG10A0A024R161 153 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 ATP2A1O14983 1001 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 ZBED4O75132 1171 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 SNAI1O95863 264 aaPredicted RBP18.95■□□□□ 0.62
VAPA-204ENST00000577901 GSPT1P15170 499 aaKnown RBP18.95■□□□□ 0.62
VAPA-204ENST00000577901 EPHB4P54760 987 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 PPARAQ07869 468 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 ALX1Q15699 326 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 VPS53Q5VIR6 699 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 MAMDC4Q6UXC1 1216 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 CPXCR1Q8N123 301 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 NUP133Q8WUM0 1156 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 RNPC3Q96LT9 517 aaKnown RBP18.95■□□□□ 0.62
VAPA-204ENST00000577901 TMEM39AQ9NV64 488 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 CTDP1Q9Y5B0 961 aaPredicted RBP18.95■□□□□ 0.62
VAPA-204ENST00000577901 VCANP13611 3396 aa18.95■□□□□ 0.62
VAPA-204ENST00000577901 CUL9Q8IWT3 2517 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 IGKV6D-41A0A0C4DH26 115 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 MOXD2PA6NHM9 499 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 HSPD1P10809 573 aaKnown RBP18.94■□□□□ 0.62
VAPA-204ENST00000577901 ANKRD33Q7Z3H0 272 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 ZNF467Q7Z7K2 595 aaPredicted RBP18.94■□□□□ 0.62
VAPA-204ENST00000577901 KLHDC9Q8NEP7 349 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 KIFC2Q96AC6 838 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 TTYH1Q9H313 450 aaPredicted RBP18.94■□□□□ 0.62
VAPA-204ENST00000577901 STARD7Q9NQZ5 370 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 ZHX1Q9UKY1 873 aaPredicted RBP18.94■□□□□ 0.62
VAPA-204ENST00000577901 SMCHD1A6NHR9 2005 aa18.94■□□□□ 0.62
VAPA-204ENST00000577901 DCDC2CA8MYV0 355 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 FOXP2O15409 715 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 PRDM1O75626 825 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 FGAP02671 866 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 FPGSQ05932 587 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 FAAP100Q0VG06 881 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 KCNA10Q16322 511 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 ZNF589Q86UQ0 364 aaPredicted RBP18.93■□□□□ 0.62
VAPA-204ENST00000577901 MAFAQ8NHW3 353 aaPredicted RBP18.93■□□□□ 0.62
VAPA-204ENST00000577901 MYLIPQ8WY64 445 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 MKL1Q969V6 931 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 CEP95Q96GE4 821 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 TOX2Q96NM4 488 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 SLC38A10Q9HBR0 1119 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 RAVER2Q9HCJ3 691 aaKnown RBP18.93■□□□□ 0.62
VAPA-204ENST00000577901 FEM1BQ9UK73 627 aa18.93■□□□□ 0.62
VAPA-204ENST00000577901 DUSP11O75319 330 aaKnown RBP18.92■□□□□ 0.62
VAPA-204ENST00000577901 ACVR2BQ13705 512 aa18.92■□□□□ 0.62
VAPA-204ENST00000577901 CCSAPQ6IQ19 270 aaPredicted RBP18.92■□□□□ 0.62
VAPA-204ENST00000577901 ANKRD35Q8N283 1001 aa18.92■□□□□ 0.62
VAPA-204ENST00000577901 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.92■□□□□ 0.62
VAPA-204ENST00000577901 MTMR4Q9NYA4 1195 aa18.92■□□□□ 0.62
VAPA-204ENST00000577901 ANAPC4Q9UJX5 808 aa18.92■□□□□ 0.62
VAPA-204ENST00000577901 SYNPO2Q9UMS6 1093 aa18.92■□□□□ 0.62
VAPA-204ENST00000577901 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
VAPA-204ENST00000577901 SPTBN5Q9NRC6 3674 aaKnown RBP18.91■□□□□ 0.62
VAPA-204ENST00000577901 MYADML2A6NDP7 307 aa18.91■□□□□ 0.62
VAPA-204ENST00000577901 TTLL1O95922 423 aa18.91■□□□□ 0.62
VAPA-204ENST00000577901 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.91■□□□□ 0.626e-6■□□□□ 10
VAPA-204ENST00000577901 LRRC47Q8N1G4 583 aaKnown RBP18.91■□□□□ 0.62
VAPA-204ENST00000577901 GMCL1P1Q8NEA9 526 aa18.91■□□□□ 0.62
VAPA-204ENST00000577901 RUFY2Q8WXA3 655 aa18.91■□□□□ 0.62
VAPA-204ENST00000577901 FBXO40Q9UH90 709 aa18.91■□□□□ 0.62
VAPA-204ENST00000577901 C6orf222P0C671 652 aaPredicted RBP18.9■□□□□ 0.62
VAPA-204ENST00000577901 TSPY3P0CV98 308 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 TSPY8P0CW00 308 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 OAZ1P54368 228 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 CHST13Q8NET6 341 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 FGD4Q96M96 766 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 GLT1D1Q96MS3 346 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 ABHD16BQ9H3Z7 469 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 ZMYM6O95789 1325 aa18.9■□□□□ 0.62
VAPA-204ENST00000577901 TMEM265A0A087WTH1 108 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 ADCY6O43306 1168 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 TIMP1P01033 207 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 FOSL2P15408 326 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 CST5P28325 142 aaPredicted RBP18.89■□□□□ 0.61
VAPA-204ENST00000577901 IRX5P78411 483 aaPredicted RBP18.89■□□□□ 0.61
VAPA-204ENST00000577901 TFAP4Q01664 338 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 CCDC144BQ3MJ40 725 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 SLFN13Q68D06 897 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 PCSK9Q8NBP7 692 aaKnown RBP18.89■□□□□ 0.61
VAPA-204ENST00000577901 SPC25Q9HBM1 224 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 ELP1O95163 1332 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 MROH7Q68CQ1 1323 aa18.89■□□□□ 0.61
VAPA-204ENST00000577901 ASGR1P07306 291 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 BMP3P12645 472 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 CDK7P50613 346 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 GJA9P57773 515 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 ARMCX2Q7L311 632 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 NEDD1Q8NHV4 660 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 DSCC1Q9BVC3 393 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 UPF3AQ9H1J1 476 aaKnown RBP18.88■□□□□ 0.61
VAPA-204ENST00000577901 HOMER2Q9NSB8 354 aa18.88■□□□□ 0.61
VAPA-204ENST00000577901 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms