RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 CHST13Q8NET6 341 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 SHISA4Q96DD7 197 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 TRERF1Q96PN7 1200 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 UBA5Q9GZZ9 404 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 CPVLQ9H3G5 476 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 VAT1LQ9HCJ6 419 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 PAK6Q9NQU5 681 aaPredicted RBP10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 CNPY2Q9Y2B0 182 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 TAF6LQ9Y6J9 622 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 BRCA2P51587 3418 aa10.8□□□□□ -0.68
CDKN2A-211ENST00000577854 A0A0G2JMZ2 1700 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 PTPDC1A2A3K4 754 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 POTEB2H3BUK9 544 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 ATP2A1O14983 1001 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 PLA2G6O60733 806 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 HOXC6P09630 235 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 NOVP48745 357 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 TKFCQ3LXA3 575 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 ASPRV1Q53RT3 343 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 OLFML2BQ68BL8 750 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 STOX1Q6ZVD7 989 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 CATIPQ7Z7H3 387 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 NUP133Q8WUM0 1156 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 DPF3Q92784 378 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 MAML3Q96JK9 1138 aa10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 ZHX1Q9UKY1 873 aaPredicted RBP10.79□□□□□ -0.68
CDKN2A-211ENST00000577854 CCDC69A6NI79 296 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 PRC1O43663 620 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 ICAM1P05362 532 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 MCM5P33992 734 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 FGD1P98174 961 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 PRAMEF19Q5SWL8 479 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 MAP3K21Q5TCX8 1036 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 HTATIP2Q9BUP3 242 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 RANBP17Q9H2T7 1088 aaKnown RBP10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 NAP1L2Q9ULW6 460 aaPredicted RBP10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 LAMA4Q16363 1823 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 ZNF536O15090 1300 aa10.78□□□□□ -0.68
CDKN2A-211ENST00000577854 MSCO60682 206 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 REC8O95072 547 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 SNHG28P0DPA3 235 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 CALML3P27482 149 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 CDC37Q16543 378 aaPredicted RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 MUM1L1Q5H9M0 696 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 BTNL9Q6UXG8 535 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 NOL8Q76FK4 1167 aaKnown RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 NECAB2Q7Z6G3 386 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 HOMER1Q86YM7 354 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 MB21D2Q8IYB1 491 aaPredicted RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 DIS3LQ8TF46 1054 aaKnown RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 PIBF1Q8WXW3 757 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 PAWRQ96IZ0 340 aaKnown RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 TINF2Q9BSI4 451 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 LRRC2Q9BYS8 371 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 DDX20Q9UHI6 824 aaKnown RBP10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 PNMA2Q9UL42 364 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 PFASO15067 1338 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 PLXNB2O15031 1838 aa10.77□□□□□ -0.69
CDKN2A-211ENST00000577854 MKI67P46013 3256 aaKnown RBP10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 RLFQ13129 1914 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 KLRF2D3W0D1 207 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 CYBAP13498 195 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 CNTN2Q02246 1040 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 SEC23AQ15436 765 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 SYNE3Q6ZMZ3 975 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 RAB11FIP4Q86YS3 637 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 ADGRF4Q8IZF3 695 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 ANKS1AQ92625 1134 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 SENP2Q9HC62 589 aa10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 KIAA0100Q14667 2235 aaKnown RBP10.76□□□□□ -0.69
CDKN2A-211ENST00000577854 COL11A1P12107 1806 aaPredicted RBP10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 KBTBD13C9JR72 458 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 NFIBO00712 420 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 SEPT4O43236 478 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 RARBP10826 455 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 ANTXR2P58335 489 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 BAATQ14032 418 aaPredicted RBP10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 KRT32Q14532 448 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 RNF207Q6ZRF8 634 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 ARMCX2Q7L311 632 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 FBXO11Q86XK2 927 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 CCDC144CPQ8IYA2 1237 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 STAG2Q8N3U4 1231 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 TRPV1Q8NER1 839 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 TMEM87BQ96K49 555 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 NEK1Q96PY6 1258 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 CRISPLD2Q9H0B8 497 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 C11orf49Q9H6J7 331 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 DOCK3Q8IZD9 2030 aa10.75□□□□□ -0.69
CDKN2A-211ENST00000577854 ASB14A6NK59 587 aa10.74□□□□□ -0.69
CDKN2A-211ENST00000577854 TNRC18O15417 2968 aaPredicted RBP10.74□□□□□ -0.69
CDKN2A-211ENST00000577854 EVI5O60447 810 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms