RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PARP2Q9UGN5 583 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 CALCRLQ16602 461 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 TRIM68Q6AZZ1 485 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 MYOCDQ8IZQ8 938 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 FRMD4BQ9Y2L6 1034 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 GNA14O95837 355 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 FAM47AQ5JRC9 791 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 ZNF365Q70YC5 407 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 P2RX5Q93086 422 aa14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 SPATS2LQ9NUQ6 558 aaKnown RBP14.46□□□□□ -0.09
PCDHGB3-201ENST00000576222 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 CIAO1O76071 339 aa14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 TBC1D8O95759 1140 aa14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 TRAPPC10P48553 1259 aa14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 WHAMMQ8TF30 809 aa14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 U2AF1L4Q8WU68 220 aaKnown RBP14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 MCUR1Q96AQ8 359 aa14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 INTS9Q9NV88 658 aaKnown RBP14.46□□□□□ -0.1
PCDHGB3-201ENST00000576222 CALUO43852 315 aaPredicted RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 GUCY2CP25092 1073 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 UHMK1Q8TAS1 419 aaKnown RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 HDAC9Q9UKV0 1011 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 LOC102724159A0A0B4J2E5 919 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 HMGB1P1B2RPK0 211 aaPredicted RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 IL2RBP14784 551 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 PWP2Q15269 919 aaKnown RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 SPATA24Q86W54 205 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 MB21D1Q8N884 522 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 PRR36Q9H6K5 1346 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 AATFQ9NY61 560 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 NFU1Q9UMS0 254 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 METP08581 1390 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 USP42Q9H9J4 1324 aaKnown RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 SPDYE3A6NKU9 549 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 C6orf229H3BNL8 230 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 H2AFZP0C0S5 128 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 EIF4A3P38919 411 aaKnown RBP14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 LIFRP42702 1097 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 RASSF2P50749 326 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 H2AFVQ71UI9 128 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 JAG2Q9Y219 1238 aa14.45□□□□□ -0.1
PCDHGB3-201ENST00000576222 MROH5Q6ZUA9 1318 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 ANO9A1A5B4 782 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 USP17L12C9JPN9 530 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 USP17L21D6R901 530 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 TECP42680 631 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 IFNAR2P48551 515 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 NLRP3Q96P20 1036 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 NAP1L4Q99733 375 aaKnown RBP14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 RAB3IPQ96QF0 476 aaPredicted RBP14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 ZSWIM5Q9P217 1185 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 PCDH11XQ9BZA7 1347 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 PCDH11YQ9BZA8 1340 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 CDC25AP30304 524 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 RBM43Q6ZSC3 357 aaKnown RBP14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 PCDHA13Q9Y5I0 950 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 OR52Z1P0C646 297 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 CASP1P29466 404 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 ADD2P35612 726 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 TFAP4Q01664 338 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 EPHA10Q5JZY3 1008 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 ZNF579Q8NAF0 562 aaKnown RBP14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 MRRFQ96E11 262 aaKnown RBP14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 HDAC6Q9UBN7 1215 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 USP6P35125 1406 aa14.44□□□□□ -0.1
PCDHGB3-201ENST00000576222 FOXN1O15353 648 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 CIB2O75838 187 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 LUC7L3O95232 432 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 LDHBP07195 334 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 STAT1P42224 750 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 HHATQ5VTY9 493 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 CEP128Q6ZU80 1094 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 THAP9Q9H5L6 903 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 MRPL44Q9H9J2 332 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 NOVA2Q9UNW9 492 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 SUN1O94901 812 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 FTCDO95954 541 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 ABCB4P21439 1286 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 HAUS3Q68CZ6 603 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 STOX1Q6ZVD7 989 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 ADAT2Q7Z6V5 191 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 REXO1Q8N1G1 1221 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 PHKA1P46020 1223 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 KIF11P52732 1056 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 PLS1Q14651 629 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 NAA35Q5VZE5 725 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 METTL16Q86W50 562 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 VPS52Q8N1B4 723 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 ENGASEQ8NFI3 743 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 VIPAS39Q9H9C1 493 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 TMOD2Q9NZR1 351 aa14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 NBPF5PQ86XG9 351 aaPredicted RBP14.43□□□□□ -0.1
PCDHGB3-201ENST00000576222 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms