RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 PCSK9Q8NBP7 692 aaKnown RBP24.82■■□□□ 1.56
SPNS3-203ENST00000575185 ATP2A1O14983 1001 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 CTAGE5O15320 804 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 MS4A1P11836 297 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 ADGRE1Q14246 886 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 GNASQ5JWF2 1037 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 ANKRD35Q8N283 1001 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 TMEM199Q8N511 208 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 STRBPQ96SI9 672 aaKnown RBP24.81■■□□□ 1.56
SPNS3-203ENST00000575185 KATNBL1Q9H079 304 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 ABHD16BQ9H3Z7 469 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 MKNK2Q9HBH9 465 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 CLIP2Q9UDT6 1046 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 RAPGEFL1Q9UHV5 662 aa24.81■■□□□ 1.56
SPNS3-203ENST00000575185 GSG1L2A8MUP6 293 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 MINDY4BA8MYZ0 360 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 ZBED4O75132 1171 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 COL9A1P20849 921 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 CYP2C18P33260 490 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 BEX3Q00994 111 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 CCDC144CPQ8IYA2 1237 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 SPC25Q9HBM1 224 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 SLC38A10Q9HBR0 1119 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 HOMER2Q9NSB8 354 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 ZBTB40Q9NUA8 1239 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 CXXC1Q9P0U4 656 aaPredicted RBP24.8■■□□□ 1.56
SPNS3-203ENST00000575185 COG6Q9Y2V7 657 aa24.8■■□□□ 1.56
SPNS3-203ENST00000575185 IGKV6D-41A0A0C4DH26 115 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.79■■□□□ 1.56
SPNS3-203ENST00000575185 PTGS1P23219 599 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 CNTN2Q02246 1040 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 SBK1Q52WX2 424 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 PSRC1Q6PGN9 363 aaPredicted RBP24.79■■□□□ 1.56
SPNS3-203ENST00000575185 CCDC174Q6PII3 467 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.79■■□□□ 1.56
SPNS3-203ENST00000575185 LRRC47Q8N1G4 583 aaKnown RBP24.79■■□□□ 1.56
SPNS3-203ENST00000575185 CTDP1Q9Y5B0 961 aaPredicted RBP24.79■■□□□ 1.56
SPNS3-203ENST00000575185 UMODL1Q5DID0 1318 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 BDP1A6H8Y1 2624 aa24.79■■□□□ 1.56
SPNS3-203ENST00000575185 LCTP09848 1927 aa24.78■■□□□ 1.56
SPNS3-203ENST00000575185 SMARCA5O60264 1052 aaPredicted RBP24.78■■□□□ 1.56
SPNS3-203ENST00000575185 PRDM1O75626 825 aa24.78■■□□□ 1.56
SPNS3-203ENST00000575185 CD4P01730 458 aa24.78■■□□□ 1.56
SPNS3-203ENST00000575185 CCDC85BQ15834 202 aaPredicted RBP24.78■■□□□ 1.56
SPNS3-203ENST00000575185 ZSCAN25Q6NSZ9 544 aa24.78■■□□□ 1.56
SPNS3-203ENST00000575185 EPB41L4AQ9HCS5 686 aaPredicted RBP24.78■■□□□ 1.56
SPNS3-203ENST00000575185 THEGQ9P2T0 379 aa24.78■■□□□ 1.56
SPNS3-203ENST00000575185 ASTN1O14525 1302 aa24.78■■□□□ 1.56
SPNS3-203ENST00000575185 TLR3O15455 904 aaKnown RBP24.77■■□□□ 1.56
SPNS3-203ENST00000575185 AKNAD1Q5T1N1 836 aa24.77■■□□□ 1.56
SPNS3-203ENST00000575185 CEP95Q96GE4 821 aa24.77■■□□□ 1.56
SPNS3-203ENST00000575185 NKX2-4Q9H2Z4 354 aa24.77■■□□□ 1.56
SPNS3-203ENST00000575185 IL23AQ9NPF7 189 aa24.77■■□□□ 1.56
SPNS3-203ENST00000575185 DDX49Q9Y6V7 483 aaKnown RBP24.77■■□□□ 1.56
SPNS3-203ENST00000575185 TRANK1O15050 2925 aa24.76■■□□□ 1.55
SPNS3-203ENST00000575185 CXCL17Q6UXB2 119 aa24.76■■□□□ 1.55
SPNS3-203ENST00000575185 CHST13Q8NET6 341 aa24.76■■□□□ 1.55
SPNS3-203ENST00000575185 ATXN2LQ8WWM7 1075 aaKnown RBP24.76■■□□□ 1.55
SPNS3-203ENST00000575185 OSBP2Q969R2 916 aa24.76■■□□□ 1.55
SPNS3-203ENST00000575185 FBXO40Q9UH90 709 aa24.76■■□□□ 1.55
SPNS3-203ENST00000575185 FEM1BQ9UK73 627 aa24.76■■□□□ 1.55
SPNS3-203ENST00000575185 YBX2Q9Y2T7 364 aaKnown RBP24.76■■□□□ 1.55
SPNS3-203ENST00000575185 IGFBP4P22692 258 aa24.75■■□□□ 1.55
SPNS3-203ENST00000575185 ADAMTS19Q8TE59 1207 aa24.75■■□□□ 1.55
SPNS3-203ENST00000575185 HERVK_113Q902F9 699 aa24.75■■□□□ 1.55
SPNS3-203ENST00000575185 ASB2Q96Q27 587 aa24.75■■□□□ 1.55
SPNS3-203ENST00000575185 DDX19BQ9UMR2 479 aa24.75■■□□□ 1.55
SPNS3-203ENST00000575185 CHMP4CQ96CF2 233 aa24.74■■□□□ 1.55
SPNS3-203ENST00000575185 HIPK3Q9H422 1215 aa24.74■■□□□ 1.55
SPNS3-203ENST00000575185 MTMR4Q9NYA4 1195 aa24.74■■□□□ 1.55
SPNS3-203ENST00000575185 MSRAQ9UJ68 235 aa24.74■■□□□ 1.55
SPNS3-203ENST00000575185 TCF20Q9UGU0 1960 aaKnown RBP24.74■■□□□ 1.55
SPNS3-203ENST00000575185 NCOR1O75376 2440 aa24.74■■□□□ 1.55
SPNS3-203ENST00000575185 GRIN2DO15399 1336 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 SOWAHBA6NEL2 793 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 OAZ1P54368 228 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 NKX3-2P78367 333 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 TNFAIP2Q03169 654 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 RAB30Q15771 203 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 NOL8Q76FK4 1167 aaKnown RBP24.73■■□□□ 1.55
SPNS3-203ENST00000575185 OTOP2Q7RTS6 562 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 TLK2Q86UE8 772 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 FAM133AQ8N9E0 248 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 SLC43A3Q8NBI5 491 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 MKL1Q969V6 931 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 LRRCC1Q9C099 1032 aa24.73■■□□□ 1.55
SPNS3-203ENST00000575185 TDO2P48775 406 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 CCL23P55773 120 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 TSHZ3Q63HK5 1081 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 GIMAP6Q6P9H5 292 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 GMCL1P1Q8NEA9 526 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 AGBL1Q96MI9 1066 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 ACAD9Q9H845 621 aa24.72■■□□□ 1.55
SPNS3-203ENST00000575185 A1CFQ9NQ94 594 aaKnown RBP24.72■■□□□ 1.55
SPNS3-203ENST00000575185 ISY1Q9ULR0 285 aaKnown RBP24.72■■□□□ 1.55
SPNS3-203ENST00000575185 GNEQ9Y223 722 aaKnown RBP24.72■■□□□ 1.55
SPNS3-203ENST00000575185 ZNF536O15090 1300 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 M0R2C6 588 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 GPAA1O43292 621 aa24.71■■□□□ 1.55
SPNS3-203ENST00000575185 TTLL1O95922 423 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms