RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 LY9Q9HBG7 655 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.77
SMG6-216ENST00000575176 TOMM22Q9NS69 142 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 PPP4R2Q9NY27 417 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 RPTORQ8N122 1335 aa10.21□□□□□ -0.78
SMG6-216ENST00000575176 DOCK5Q9H7D0 1870 aa10.21□□□□□ -0.78
SMG6-216ENST00000575176 PFASO15067 1338 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 PPP1R11O60927 126 aaPredicted RBP10.2□□□□□ -0.78
SMG6-216ENST00000575176 SGPL1O95470 568 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 GOLGA8HP0CJ92 632 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 COL6A1P12109 1028 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 PLS1Q14651 629 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 ADCK5Q3MIX3 580 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 SYDE2Q5VT97 1194 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
SMG6-216ENST00000575176 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 FAM133AQ8N9E0 248 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 CLEC4DQ8WXI8 215 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 KRT23Q9C075 422 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 RNF208Q9H0X6 261 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
SMG6-216ENST00000575176 DDX49Q9Y6V7 483 aaKnown RBP10.2□□□□□ -0.78
SMG6-216ENST00000575176 NID2Q14112 1375 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
SMG6-216ENST00000575176 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 NFIBO00712 420 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
SMG6-216ENST00000575176 CYTH3O43739 400 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 ICAM1P05362 532 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 ZNF865P0CJ78 1059 aaPredicted RBP10.19□□□□□ -0.78
SMG6-216ENST00000575176 FDX1P10109 184 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 COPB2P35606 906 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 UBXN2AP68543 259 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 MLLT1Q03111 559 aaPredicted RBP10.19□□□□□ -0.78
SMG6-216ENST00000575176 CCDC96Q2M329 555 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 WDR78Q5VTH9 848 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 MAMDC4Q6UXC1 1216 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 CHST3Q7LGC8 479 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 TRMT44Q8IYL2 757 aaKnown RBP10.19□□□□□ -0.78
SMG6-216ENST00000575176 CPXCR1Q8N123 301 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 DEFB118Q96PH6 123 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 MMP19Q99542 508 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 ANO2Q9NQ90 1003 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 RNF146Q9NTX7 359 aa10.19□□□□□ -0.78
SMG6-216ENST00000575176 DIS3Q9Y2L1 958 aaKnown RBP10.19□□□□□ -0.78
SMG6-216ENST00000575176 CDH23Q9H251 3354 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 SNAI1O95863 264 aaPredicted RBP10.18□□□□□ -0.78
SMG6-216ENST00000575176 FCER1AP12319 257 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 CNTN2Q02246 1040 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 GHRHRQ02643 423 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 GRM4Q14833 912 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
SMG6-216ENST00000575176 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
SMG6-216ENST00000575176 IQCA1Q86XH1 822 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 CHST13Q8NET6 341 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 MORC4Q8TE76 937 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 CHURC1Q8WUH1 139 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
SMG6-216ENST00000575176 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
SMG6-216ENST00000575176 JMJD4Q9H9V9 463 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 GPCPD1Q9NPB8 672 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 MTMR7Q9Y216 660 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 IVNS1ABPQ9Y6Y0 642 aa10.18□□□□□ -0.78
SMG6-216ENST00000575176 SCN10AQ9Y5Y9 1956 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 SYNGAP1Q96PV0 1343 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 ZBED4O75132 1171 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 HSPA4P34932 840 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
SMG6-216ENST00000575176 ASPRV1Q53RT3 343 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 CCDC174Q6PII3 467 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 SLC30A10Q6XR72 485 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 ADGRF4Q8IZF3 695 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 NCOA7Q8NI08 942 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 TINF2Q9BSI4 451 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 MTA3Q9BTC8 594 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 UBA5Q9GZZ9 404 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 ACAD9Q9H845 621 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 HMX1Q9NP08 348 aaPredicted RBP10.17□□□□□ -0.78
SMG6-216ENST00000575176 HOMER2Q9NSB8 354 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 COL20A1Q9P218 1284 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 TANC1Q9C0D5 1861 aa10.17□□□□□ -0.78
SMG6-216ENST00000575176 TRIOBPQ9H2D6 2365 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 CTAGE5O15320 804 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 PRC1O43663 620 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 FARP2O94887 1054 aaPredicted RBP10.16□□□□□ -0.78
SMG6-216ENST00000575176 NEFLP07196 543 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 CENPBP07199 599 aaPredicted RBP10.16□□□□□ -0.78
SMG6-216ENST00000575176 PTGS1P23219 599 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 EDNRBP24530 442 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 KCTD2Q14681 263 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 CDC37Q16543 378 aaPredicted RBP10.16□□□□□ -0.78
SMG6-216ENST00000575176 QRICH1Q2TAL8 776 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 TKFCQ3LXA3 575 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 CCDC178Q5BJE1 867 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 PRAMEF19Q5SWL8 479 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 IFIT1BQ5T764 474 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms