RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 SCGB1D2O95969 90 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 WNT11O96014 354 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 FGAP02671 866 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 MYCLP1P12525 358 aaPredicted RBP6.33□□□□□ -1.4
TSR1-203ENST00000575049 GBP1P32455 592 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 KIR3DL1P43629 444 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 GIPRP48546 466 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 EIF6P56537 245 aaKnown RBP6.33□□□□□ -1.4
TSR1-203ENST00000575049 NFKB2Q00653 900 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 MCL1Q07820 350 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 HLTFQ14527 1009 aaKnown RBP eCLIP6.33□□□□□ -1.4
TSR1-203ENST00000575049 ZRSR2Q15696 482 aaKnown RBP6.33□□□□□ -1.4
TSR1-203ENST00000575049 NFXL1Q6ZNB6 911 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 NLRC3Q7RTR2 1065 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 MISP3Q96FF7 219 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 SENP7Q9BQF6 1050 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 ZNF700Q9H0M5 742 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 CAAP1Q9H8G2 361 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 PFDN2Q9UHV9 154 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 SNX11Q9Y5W9 270 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 CAPN6Q9Y6Q1 641 aa6.33□□□□□ -1.4
TSR1-203ENST00000575049 A0A087X0B3 334 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 UBOX5O94941 541 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
TSR1-203ENST00000575049 ATF3P18847 181 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 POLR2BP30876 1174 aaKnown RBP6.32□□□□□ -1.4
TSR1-203ENST00000575049 CLCN7P51798 805 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 PRKCQQ04759 706 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 BRD3Q15059 726 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 NBPF11Q86T75 865 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 STK11IPQ8N1F8 1099 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 GPATCH11Q8N954 259 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
TSR1-203ENST00000575049 RNF141Q8WVD5 230 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 MFSD3Q96ES6 412 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 HRASLS5Q96KN8 279 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 KREMEN1Q96MU8 473 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 MCM8Q9UJA3 840 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 VAV3Q9UKW4 847 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 SLC5A6Q9Y289 635 aa6.32□□□□□ -1.4
TSR1-203ENST00000575049 COL17A1Q9UMD9 1497 aaPredicted RBP6.32□□□□□ -1.4
TSR1-203ENST00000575049 TNFRSF10CO14798 259 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 RASGRP1O95267 797 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 BDNFP23560 247 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 TNK2Q07912 1038 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 BNIP3Q12983 259 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 FXNQ16595 210 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 AOC3Q16853 763 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 KRBA2Q6ZNG9 492 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 WFDC3Q8IUB2 231 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 NIM1KQ8IY84 436 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 MYO1HQ8N1T3 1032 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 RBBP8NLQ8NC74 664 aaPredicted RBP6.31□□□□□ -1.4
TSR1-203ENST00000575049 FLCNQ8NFG4 579 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 TTC8Q8TAM2 541 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 NINJ1Q92982 152 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 Q96M66 194 aa6.31□□□□□ -1.4
TSR1-203ENST00000575049 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 GJB6O95452 261 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 SOX5P35711 763 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 CCNFP41002 786 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 RAB27AP51159 221 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 CDKAL1Q5VV42 579 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 ZNF574Q6ZN55 896 aaPredicted RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 FAM9BQ8IZU0 186 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 UBR7Q8N806 425 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 PIWIL2Q8TC59 973 aaKnown RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 HSPA12BQ96MM6 686 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 ZMYM5Q9UJ78 669 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 FBXO9Q9UK97 447 aaPredicted RBP6.3□□□□□ -1.4
TSR1-203ENST00000575049 ST14Q9Y5Y6 855 aa6.3□□□□□ -1.4
TSR1-203ENST00000575049 H3BS24 57 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 FOSP01100 380 aaPredicted RBP6.29□□□□□ -1.4
TSR1-203ENST00000575049 CD8BP10966 210 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 CD96P40200 585 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 GUCY2FP51841 1108 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 SSRP1Q08945 709 aaKnown RBP6.29□□□□□ -1.4
TSR1-203ENST00000575049 CT47A1Q5JQC4 288 aaPredicted RBP6.29□□□□□ -1.4
TSR1-203ENST00000575049 SPRED2Q7Z698 418 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 LSRQ86X29 649 aaPredicted RBP6.29□□□□□ -1.4
TSR1-203ENST00000575049 TAB3Q8N5C8 712 aaPredicted RBP6.29□□□□□ -1.4
TSR1-203ENST00000575049 DTWD2Q8NBA8 298 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 ASB11Q8WXH4 323 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 VWCEQ96DN2 955 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 CRBNQ96SW2 442 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 SLC9A7Q96T83 725 aa6.29□□□□□ -1.4
TSR1-203ENST00000575049 NAP1L4Q99733 375 aaKnown RBP6.29□□□□□ -1.4
TSR1-203ENST00000575049 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms