RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 RASSF8Q8NHQ8 419 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 TDRD3Q9H7E2 651 aaKnown RBP11.86□□□□□ -0.51
USP43-205ENST00000574408 PI4KBQ9UBF8 816 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 BLZF1Q9H2G9 400 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 SLC16A2P36021 539 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 UBASH3AP57075 661 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 DPYDQ12882 1025 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 KARSQ15046 597 aaKnown RBP11.86□□□□□ -0.51
USP43-205ENST00000574408 CFAP100Q494V2 611 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
USP43-205ENST00000574408 DPF2Q92785 391 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 PYM1Q9BRP8 204 aaKnown RBP11.86□□□□□ -0.51
USP43-205ENST00000574408 NFE2L3Q9Y4A8 694 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 PP2D1A8MPX8 630 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 CCNT1O60563 726 aaKnown RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 SF3B2Q13435 895 aaKnown RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 KLHL10Q6JEL2 608 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 TTLL6Q8N841 843 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 JMJD4Q9H9V9 463 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 ESYT2A0FGR8 921 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 NEMFO60524 1076 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 GSDMDP57764 484 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 NEK8Q86SG6 692 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 TBCKQ8TEA7 893 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 hCG_1984214I3L0E3 225 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 CBFA2T2O43439 604 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 UBA7P41226 1012 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 STAT6P42226 847 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 BAG6P46379 1132 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 ADCY7P51828 1080 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 GPATCH4Q5T3I0 446 aaKnown RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 ZNF713Q8N859 430 aaPredicted RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 PRMT6Q96LA8 375 aaPredicted RBP11.85□□□□□ -0.51
USP43-205ENST00000574408 GSDMAQ96QA5 445 aa11.85□□□□□ -0.51
USP43-205ENST00000574408 SKILP12757 684 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
USP43-205ENST00000574408 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
USP43-205ENST00000574408 CCDC93Q567U6 631 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 PPP4R3BQ5MIZ7 849 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 ZNF771Q7L3S4 317 aaPredicted RBP11.84□□□□□ -0.51
USP43-205ENST00000574408 IMPACTQ9P2X3 320 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 PNMA6FA0A0J9YX94 578 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 LAD1O00515 517 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 RAD17O75943 681 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 GDF11O95390 407 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 OR52Z1P0C646 297 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 SEPT2Q15019 361 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 TRERF1Q96PN7 1200 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 MED15Q96RN5 788 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 PLIN2Q99541 437 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 MTRQ99707 1265 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 KANSL2Q9H9L4 492 aa11.84□□□□□ -0.51
USP43-205ENST00000574408 USP17L10C9JJH3 530 aa11.83□□□□□ -0.51
USP43-205ENST00000574408 MYO1BO43795 1136 aa11.83□□□□□ -0.51
USP43-205ENST00000574408 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.51
USP43-205ENST00000574408 STX17P56962 302 aa11.83□□□□□ -0.51
USP43-205ENST00000574408 CUL4BQ13620 913 aa11.83□□□□□ -0.51
USP43-205ENST00000574408 LARGE2Q8N3Y3 721 aa11.83□□□□□ -0.51
USP43-205ENST00000574408 DISC1Q9NRI5 854 aa11.83□□□□□ -0.51
USP43-205ENST00000574408 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 NPM3O75607 178 aaKnown RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 DPEP1P16444 411 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 ICA1Q05084 483 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 PTPN21Q16825 1174 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 RRAGBQ5VZM2 374 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 ZNF277Q9NRM2 450 aaPredicted RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 PPP1R11O60927 126 aaPredicted RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 PRPHP41219 470 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 SLC1A4P43007 532 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 CCZ1BP86790 482 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 CCZ1P86791 482 aaPredicted RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 SAMSN1Q9NSI8 373 aaKnown RBP11.83□□□□□ -0.52
USP43-205ENST00000574408 MYH4Q9Y623 1939 aa11.83□□□□□ -0.52
USP43-205ENST00000574408 TNNI2P48788 182 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 SLFN13Q68D06 897 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 RTKN2Q8IZC4 609 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 NYAP2Q9P242 653 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 SYNRGQ9UMZ2 1314 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 SIPA1L1O43166 1804 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 CLRN2A0PK11 232 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 TMEM232C9JQI7 657 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 ZBTB5O15062 677 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 ENTPD3O75355 529 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 ZNF18P17022 549 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 SFPQP23246 707 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP43-205ENST00000574408 UBE2SQ16763 222 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 ABCB5Q2M3G0 1257 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 ARMCX5Q6P1M9 558 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 TATDN1Q6P1N9 297 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 POTEDQ86YR6 584 aa11.82□□□□□ -0.52
USP43-205ENST00000574408 CCDC150Q8NCX0 1101 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms