RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 RFXAPO00287 272 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
NCBP3-203ENST00000574379 ALADP13716 330 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 BACE1P56817 501 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 MTMR2Q13614 643 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 SEPT2Q15019 361 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 RAB3GAP1Q15042 981 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 LRRC41Q15345 812 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 TMEM240Q5SV17 173 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 CWC27Q6UX04 472 aaKnown RBP11.84□□□□□ -0.51
NCBP3-203ENST00000574379 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 CCDC17Q96LX7 622 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 KCNH6Q9H252 994 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 CERS4Q9HA82 394 aa11.84□□□□□ -0.51
NCBP3-203ENST00000574379 YBX2Q9Y2T7 364 aaKnown RBP11.84□□□□□ -0.51
NCBP3-203ENST00000574379 CHD9Q3L8U1 2897 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 C19orf81C9J6K1 198 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
NCBP3-203ENST00000574379 RASA1P20936 1047 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 RABGGTBP53611 331 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 MFAP1P55081 439 aaKnown RBP11.83□□□□□ -0.52
NCBP3-203ENST00000574379 PPARAQ07869 468 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 ZNF365Q70YC5 407 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 GJD3Q8N144 294 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 STK11IPQ8N1F8 1099 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 ACER1Q8TDN7 264 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 IL25Q9H293 177 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 MTIF3Q9H2K0 278 aaKnown RBP11.83□□□□□ -0.52
NCBP3-203ENST00000574379 PPP4R2Q9NY27 417 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 RBPJLQ9UBG7 517 aa11.83□□□□□ -0.52
NCBP3-203ENST00000574379 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
NCBP3-203ENST00000574379 TIMP1P01033 207 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 FGAP02671 866 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 CYBAP13498 195 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 CSF2RAP15509 400 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 CHMLP26374 656 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 CCNA1P78396 465 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 C1orf53Q5VUE5 145 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 KRT40Q6A162 431 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 PSRC1Q6PGN9 363 aaPredicted RBP11.82□□□□□ -0.52
NCBP3-203ENST00000574379 USP17L2Q6R6M4 530 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 DPP9Q86TI2 863 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 CLEC10AQ8IUN9 316 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
NCBP3-203ENST00000574379 PPP1R12CQ9BZL4 782 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 EMILIN3Q9NT22 766 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 ANAPC4Q9UJX5 808 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 RAD50Q92878 1312 aa11.82□□□□□ -0.52
NCBP3-203ENST00000574379 ZNFX1Q9P2E3 1918 aaKnown RBP11.82□□□□□ -0.52
NCBP3-203ENST00000574379 PLIN4Q96Q06 1357 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 A0A1W2PRG0 241 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 GFRA3O60609 400 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 PRDM1O75626 825 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 MYOGP15173 224 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 FAAP100Q0VG06 881 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 BMP2KLQ5H9B9 411 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 FAM47AQ5JRC9 791 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 MFSD5Q6N075 450 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 SIAH1Q8IUQ4 282 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 TMEM199Q8N511 208 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 ANKS1AQ92625 1134 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.81□□□□□ -0.52
NCBP3-203ENST00000574379 MTCH2Q9Y6C9 303 aa11.81□□□□□ -0.52
NCBP3-203ENST00000574379 IGKV6D-41A0A0C4DH26 115 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 A0A1W2PQ45 241 aaPredicted RBP11.8□□□□□ -0.52
NCBP3-203ENST00000574379 A0A1W2PQY0 241 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 SLC15A5A6NIM6 579 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 SEPT4O43236 478 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 SLC3A2P08195 630 aaKnown RBP11.8□□□□□ -0.52
NCBP3-203ENST00000574379 PTPREP23469 700 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 HOXA7P31268 230 aaPredicted RBP11.8□□□□□ -0.52
NCBP3-203ENST00000574379 CLCN6P51797 869 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 USP14P54578 494 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 ICA1Q05084 483 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 PDE4BQ07343 736 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 ZYXQ15942 572 aaKnown RBP11.8□□□□□ -0.52
NCBP3-203ENST00000574379 PRAMEF19Q5SWL8 479 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 C16orf59Q7L2K0 433 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 FEZ1Q99689 392 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 ZNF287Q9HBT7 754 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 USP34Q70CQ2 3546 aa11.8□□□□□ -0.52
NCBP3-203ENST00000574379 GBF1Q92538 1859 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 ZBBXA8MT70 800 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 SGSM2O43147 1006 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 ORC4O43929 436 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 FGRP09769 529 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 OTOP2Q7RTS6 562 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 RNF180Q86T96 592 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 ZNF444Q8N0Y2 327 aaPredicted RBP11.79□□□□□ -0.52
NCBP3-203ENST00000574379 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
NCBP3-203ENST00000574379 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
NCBP3-203ENST00000574379 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms