RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 CCDC174Q6PII3 467 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 DCAF4Q8WV16 495 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 RNF41Q9H4P4 317 aaPredicted RBP20.5■□□□□ 0.87
ABR-227ENST00000574266 STARD7Q9NQZ5 370 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 RNF146Q9NTX7 359 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
ABR-227ENST00000574266 PARP14Q460N5 1801 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 FRMPD3Q5JV73 1810 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 SALL3Q9BXA9 1300 aa20.5■□□□□ 0.87
ABR-227ENST00000574266 GREB1LQ9C091 1923 aaPredicted RBP20.49■□□□□ 0.87
ABR-227ENST00000574266 DCDC2CA8MYV0 355 aa20.49■□□□□ 0.87
ABR-227ENST00000574266 FGAP02671 866 aa20.49■□□□□ 0.87
ABR-227ENST00000574266 VPS53Q5VIR6 699 aa20.49■□□□□ 0.87
ABR-227ENST00000574266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.49■□□□□ 0.87
ABR-227ENST00000574266 GLT1D1Q96MS3 346 aa20.49■□□□□ 0.87
ABR-227ENST00000574266 PNMA2Q9UL42 364 aa20.49■□□□□ 0.87
ABR-227ENST00000574266 HIP1O00291 1037 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 SNAI1O95863 264 aaPredicted RBP20.48■□□□□ 0.87
ABR-227ENST00000574266 C6orf222P0C671 652 aaPredicted RBP20.48■□□□□ 0.87
ABR-227ENST00000574266 HSPD1P10809 573 aaKnown RBP20.48■□□□□ 0.87
ABR-227ENST00000574266 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
ABR-227ENST00000574266 TLE2Q04725 743 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 SNX17Q15036 470 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 ARMCX2Q7L311 632 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 FAM227BQ96M60 508 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 AGBL1Q96MI9 1066 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 IL17RBQ9NRM6 502 aa20.48■□□□□ 0.87
ABR-227ENST00000574266 RANBP2P49792 3224 aaKnown RBP20.47■□□□□ 0.87
ABR-227ENST00000574266 A0A1W2PQ45 241 aaPredicted RBP20.47■□□□□ 0.87
ABR-227ENST00000574266 A0A1W2PQY0 241 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 PQBP1O60828 265 aaKnown RBP20.47■□□□□ 0.87
ABR-227ENST00000574266 CLTBP09497 229 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 RAG1P15918 1043 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 NMIQ13287 307 aaPredicted RBP20.47■□□□□ 0.87
ABR-227ENST00000574266 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 SLC17A8Q8NDX2 589 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 TTC14Q96N46 770 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 MPHOSPH6Q99547 160 aaKnown RBP20.47■□□□□ 0.87
ABR-227ENST00000574266 DIAPH3Q9NSV4 1193 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 TMEM39AQ9NV64 488 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 CCPG1Q9ULG6 757 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 PRR12Q9ULL5 1215 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 PLXNA1Q9UIW2 1896 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 MROH7Q68CQ1 1323 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 CCDC171Q6TFL3 1326 aa20.47■□□□□ 0.87
ABR-227ENST00000574266 A0A0D9SFI3 127 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 ZNF213O14771 459 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 ZEB2O60315 1214 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 NMT2O60551 498 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 NT5C2P49902 561 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 ACLYP53396 1101 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 KCNA10Q16322 511 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 CCDC144BQ3MJ40 725 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 CCDC178Q5BJE1 867 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 GNASQ5JWF2 1037 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 BADQ92934 168 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 TCP11L1Q9NUJ3 509 aa20.46■□□□□ 0.87
ABR-227ENST00000574266 SMCHD1A6NHR9 2005 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 FGRP09769 529 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 SDSP20132 328 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 HAND2P61296 217 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 AKNAD1Q5T1N1 836 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 SMC5Q8IY18 1101 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 ESR2Q92731 530 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 AP5M1Q9H0R1 490 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 ADD3Q9UEY8 706 aaKnown RBP20.45■□□□□ 0.86
ABR-227ENST00000574266 SYNRGQ9UMZ2 1314 aa20.45■□□□□ 0.86
ABR-227ENST00000574266 TLR3O15455 904 aaKnown RBP20.44■□□□□ 0.86
ABR-227ENST00000574266 ADAMTS4O75173 837 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 TNFAIP2Q03169 654 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 NSMFQ6X4W1 530 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 TOX2Q96NM4 488 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 A1CFQ9NQ94 594 aaKnown RBP20.44■□□□□ 0.86
ABR-227ENST00000574266 PDLIM7Q9NR12 457 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 ELP1O95163 1332 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 ZMYM6O95789 1325 aa20.44■□□□□ 0.86
ABR-227ENST00000574266 ICAM1P05362 532 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 CNTN2Q02246 1040 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 SYDE2Q5VT97 1194 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 IQCA1Q86XH1 822 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 FAM133AQ8N9E0 248 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 KLHDC9Q8NEP7 349 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 LENG1Q96BZ8 264 aaPredicted RBP20.43■□□□□ 0.86
ABR-227ENST00000574266 TMEM47Q9BQJ4 181 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 GPCPD1Q9NPB8 672 aa20.43■□□□□ 0.86
ABR-227ENST00000574266 B4DLN1 442 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 FOXP2O15409 715 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 ASGR1P07306 291 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 MRPL12P52815 198 aaKnown RBP20.42■□□□□ 0.86
ABR-227ENST00000574266 GJA9P57773 515 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 SNAP25P60880 206 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 NUCB1Q02818 461 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 ZNF697Q5TEC3 545 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 CWC27Q6UX04 472 aaKnown RBP20.42■□□□□ 0.86
ABR-227ENST00000574266 CTNNA3Q9UI47 895 aa20.42■□□□□ 0.86
ABR-227ENST00000574266 DNAH12Q6ZR08 3092 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms