RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ESR2Q92731 530 aa30.69■■■□□ 2.5
NPLOC4-215ENST00000574095 ZKSCAN3Q9BRR0 538 aa30.69■■■□□ 2.5
NPLOC4-215ENST00000574095 ZNF865P0CJ78 1059 aaPredicted RBP30.68■■■□□ 2.5
NPLOC4-215ENST00000574095 SYN1P17600 705 aa30.68■■■□□ 2.5
NPLOC4-215ENST00000574095 SLC16A2P36021 539 aa30.68■■■□□ 2.5
NPLOC4-215ENST00000574095 TTC14Q96N46 770 aa30.68■■■□□ 2.5
NPLOC4-215ENST00000574095 PRO3102Q9H379 93 aa30.68■■■□□ 2.5
NPLOC4-215ENST00000574095 FRMPD2Q68DX3 1309 aaPredicted RBP30.68■■■□□ 2.5
NPLOC4-215ENST00000574095 ALAS1P13196 640 aa30.67■■■□□ 2.5
NPLOC4-215ENST00000574095 ACAD9Q9H845 621 aa30.67■■■□□ 2.5
NPLOC4-215ENST00000574095 GPCPD1Q9NPB8 672 aa30.67■■■□□ 2.5
NPLOC4-215ENST00000574095 RNF146Q9NTX7 359 aa30.67■■■□□ 2.5
NPLOC4-215ENST00000574095 CNPY2Q9Y2B0 182 aa30.67■■■□□ 2.5
NPLOC4-215ENST00000574095 SNAI1O95863 264 aaPredicted RBP30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 FXR1P51114 621 aaKnown RBP eCLIP30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 ATN1P54259 1190 aaPredicted RBP30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 MAMDC4Q6UXC1 1216 aa30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 MSL3Q8N5Y2 521 aaKnown RBP30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 TRERF1Q96PN7 1200 aa30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 DNAH12Q6ZR08 3092 aa30.66■■■□□ 2.5
NPLOC4-215ENST00000574095 KDM4AO75164 1064 aa30.65■■■□□ 2.5
NPLOC4-215ENST00000574095 IMMTQ16891 758 aaKnown RBP30.65■■■□□ 2.5
NPLOC4-215ENST00000574095 FGD4Q96M96 766 aa30.65■■■□□ 2.5
NPLOC4-215ENST00000574095 CTNNA3Q9UI47 895 aa30.65■■■□□ 2.5
NPLOC4-215ENST00000574095 SYNGAP1Q96PV0 1343 aa30.65■■■□□ 2.5
NPLOC4-215ENST00000574095 B4E1Z4 1266 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 KBTBD13C9JR72 458 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 RARBP10826 455 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 PDHBP11177 359 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 LRRC41Q15345 812 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 TKFCQ3LXA3 575 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 BTNL9Q6UXG8 535 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 ZNF467Q7Z7K2 595 aaPredicted RBP30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 PCDH10Q9P2E7 1040 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 MCM3APO60318 1980 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 TRIOBPQ9H2D6 2365 aa30.64■■■□□ 2.5
NPLOC4-215ENST00000574095 AKR1A1P14550 325 aa30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 CNTN2Q02246 1040 aa30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 MUM1L1Q5H9M0 696 aa30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 SYDE2Q5VT97 1194 aa30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 RANBP17Q9H2T7 1088 aaKnown RBP30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 A1CFQ9NQ94 594 aaKnown RBP30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 XPNPEP3Q9NQH7 507 aa30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 CCPG1Q9ULG6 757 aa30.63■■■□□ 2.49
NPLOC4-215ENST00000574095 POTEB2H3BUK9 544 aa30.62■■■□□ 2.49
NPLOC4-215ENST00000574095 LENG1Q96BZ8 264 aaPredicted RBP30.62■■■□□ 2.49
NPLOC4-215ENST00000574095 ZHX1Q9UKY1 873 aaPredicted RBP30.62■■■□□ 2.49
NPLOC4-215ENST00000574095 RANBP2P49792 3224 aaKnown RBP30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 PGK1P00558 417 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 CHMLP26374 656 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 ADCYAP1R1P41586 468 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 IQCA1Q86XH1 822 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 DGKHQ86XP1 1220 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 FAM133AQ8N9E0 248 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 ZSWIM5Q9P217 1185 aa30.61■■■□□ 2.49
NPLOC4-215ENST00000574095 ICAM1P05362 532 aa30.6■■■□□ 2.49
NPLOC4-215ENST00000574095 ZNF543Q08ER8 600 aa30.6■■■□□ 2.49
NPLOC4-215ENST00000574095 FERMT2Q96AC1 680 aa30.6■■■□□ 2.49
NPLOC4-215ENST00000574095 GDF15Q99988 308 aa30.6■■■□□ 2.49
NPLOC4-215ENST00000574095 RAD50Q92878 1312 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 SNHG28P0DPA3 235 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 NT5C2P49902 561 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 ACVR2BQ13705 512 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 SLC39A5Q6ZMH5 540 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 ARMCX2Q7L311 632 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 CCDC144CPQ8IYA2 1237 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 RUFY2Q8WXA3 655 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 FAM184BQ9ULE4 1060 aa30.59■■■□□ 2.49
NPLOC4-215ENST00000574095 SOWAHBA6NEL2 793 aa30.58■■■□□ 2.49
NPLOC4-215ENST00000574095 RTP1P59025 263 aa30.58■■■□□ 2.49
NPLOC4-215ENST00000574095 CCDC178Q5BJE1 867 aa30.58■■■□□ 2.49
NPLOC4-215ENST00000574095 ZSCAN10Q96SZ4 725 aaPredicted RBP30.58■■■□□ 2.49
NPLOC4-215ENST00000574095 KRT23Q9C075 422 aa30.58■■■□□ 2.49
NPLOC4-215ENST00000574095 ABHD16BQ9H3Z7 469 aa30.58■■■□□ 2.49
NPLOC4-215ENST00000574095 GOLGA8HP0CJ92 632 aa30.57■■■□□ 2.48
NPLOC4-215ENST00000574095 MAGEA10P43363 369 aaPredicted RBP30.57■■■□□ 2.48
NPLOC4-215ENST00000574095 NSMFQ6X4W1 530 aa30.57■■■□□ 2.48
NPLOC4-215ENST00000574095 RNF180Q86T96 592 aa30.57■■■□□ 2.48
NPLOC4-215ENST00000574095 PNMA1Q8ND90 353 aa30.57■■■□□ 2.48
NPLOC4-215ENST00000574095 PTH1RQ03431 593 aa30.56■■■□□ 2.48
NPLOC4-215ENST00000574095 ANKS1AQ92625 1134 aa30.56■■■□□ 2.48
NPLOC4-215ENST00000574095 KAT14Q9H8E8 782 aa30.56■■■□□ 2.48
NPLOC4-215ENST00000574095 CYP39A1Q9NYL5 469 aa30.56■■■□□ 2.48
NPLOC4-215ENST00000574095 ATP11BQ9Y2G3 1177 aa30.56■■■□□ 2.48
NPLOC4-215ENST00000574095 ADAMTS4O75173 837 aa30.55■■■□□ 2.48
NPLOC4-215ENST00000574095 ENAHQ8N8S7 591 aaPredicted RBP30.55■■■□□ 2.48
NPLOC4-215ENST00000574095 PURBQ96QR8 312 aaKnown RBP30.55■■■□□ 2.48
NPLOC4-215ENST00000574095 CPVLQ9H3G5 476 aa30.55■■■□□ 2.48
NPLOC4-215ENST00000574095 CNNM2Q9H8M5 875 aa30.55■■■□□ 2.48
NPLOC4-215ENST00000574095 PHF24Q9UPV7 400 aa30.55■■■□□ 2.48
NPLOC4-215ENST00000574095 TNKSO95271 1327 aa30.54■■■□□ 2.48
NPLOC4-215ENST00000574095 BMP8BP34820 402 aa30.54■■■□□ 2.48
NPLOC4-215ENST00000574095 CCDC144BQ3MJ40 725 aa30.54■■■□□ 2.48
NPLOC4-215ENST00000574095 UBA5Q9GZZ9 404 aa30.54■■■□□ 2.48
NPLOC4-215ENST00000574095 KATNBL1Q9H079 304 aa30.54■■■□□ 2.48
NPLOC4-215ENST00000574095 DDX49Q9Y6V7 483 aaKnown RBP30.54■■■□□ 2.48
NPLOC4-215ENST00000574095 ASTN1O14525 1302 aa30.53■■■□□ 2.48
NPLOC4-215ENST00000574095 SYNRGQ9UMZ2 1314 aa30.53■■■□□ 2.48
NPLOC4-215ENST00000574095 ADCY6O43306 1168 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms