RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 SNAI1O95863 264 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-210ENST00000573903 C6orf222P0C671 652 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-210ENST00000573903 MX1P20591 662 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 SLC1A4P43007 532 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 SMAD3P84022 425 aaKnown RBP14.46□□□□□ -0.09
CCDC40-210ENST00000573903 FPGSQ05932 587 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 ZMYM1Q5SVZ6 1142 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 PI4K2BQ8TCG2 481 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 TOX2Q96NM4 488 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 SEC62Q99442 399 aaKnown RBP14.46□□□□□ -0.09
CCDC40-210ENST00000573903 ACAD9Q9H845 621 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 STX8Q9UNK0 236 aa14.46□□□□□ -0.09
CCDC40-210ENST00000573903 KCNA10Q16322 511 aa14.45□□□□□ -0.1
CCDC40-210ENST00000573903 ARMCX2Q7L311 632 aa14.45□□□□□ -0.1
CCDC40-210ENST00000573903 ANKRD33Q7Z3H0 272 aa14.45□□□□□ -0.1
CCDC40-210ENST00000573903 KLHDC9Q8NEP7 349 aa14.45□□□□□ -0.1
CCDC40-210ENST00000573903 VTI1AQ96AJ9 217 aa14.45□□□□□ -0.1
CCDC40-210ENST00000573903 GMCL1Q96IK5 515 aa14.45□□□□□ -0.1
CCDC40-210ENST00000573903 CST5P28325 142 aaPredicted RBP14.44□□□□□ -0.1
CCDC40-210ENST00000573903 TKFCQ3LXA3 575 aa14.44□□□□□ -0.1
CCDC40-210ENST00000573903 CCDC144BQ3MJ40 725 aa14.44□□□□□ -0.1
CCDC40-210ENST00000573903 CCDC174Q6PII3 467 aa14.44□□□□□ -0.1
CCDC40-210ENST00000573903 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.44□□□□□ -0.1
CCDC40-210ENST00000573903 STAG1Q8WVM7 1258 aa14.44□□□□□ -0.1
CCDC40-210ENST00000573903 RNF146Q9NTX7 359 aa14.44□□□□□ -0.1
CCDC40-210ENST00000573903 ELP1O95163 1332 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 TMEM265A0A087WTH1 108 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 A0A0U1RQG5 324 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-210ENST00000573903 ASB14A6NK59 587 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 TLR3O15455 904 aaKnown RBP14.43□□□□□ -0.1
CCDC40-210ENST00000573903 ASGR1P07306 291 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 MCCP23508 829 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 FAAP100Q0VG06 881 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 GNASQ5JWF2 1037 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
CCDC40-210ENST00000573903 CCDC144CPQ8IYA2 1237 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 OTUD7AQ8TE49 926 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-210ENST00000573903 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
CCDC40-210ENST00000573903 MYADML2A6NDP7 307 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 RANBP6O60518 1105 aaKnown RBP14.42□□□□□ -0.1
CCDC40-210ENST00000573903 PLA2G6O60733 806 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 ALAS1P13196 640 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 ITGB8P26012 769 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 GJA9P57773 515 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 CTDSPL2Q05D32 466 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 CCDC96Q2M329 555 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 CCSAPQ6IQ19 270 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-210ENST00000573903 KCTD1Q719H9 257 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 CHMP4CQ96CF2 233 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 EVI5LQ96CN4 794 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 TRERF1Q96PN7 1200 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 CDX2Q99626 313 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-210ENST00000573903 UPF3AQ9H1J1 476 aaKnown RBP14.42□□□□□ -0.1
CCDC40-210ENST00000573903 SEMA6BQ9H3T3 888 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 A1CFQ9NQ94 594 aaKnown RBP14.42□□□□□ -0.1
CCDC40-210ENST00000573903 TOMM22Q9NS69 142 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 MTMR7Q9Y216 660 aa14.42□□□□□ -0.1
CCDC40-210ENST00000573903 TIMP1P01033 207 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 CNTN2Q02246 1040 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 PPIGQ13427 754 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC40-210ENST00000573903 AAMPQ13685 434 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 ANKRD45Q5TZF3 282 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 RCSD1Q6JBY9 416 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 CCDC129Q6ZRS4 1044 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 FAM133AQ8N9E0 248 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 MAFAQ8NHW3 353 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-210ENST00000573903 FGD4Q96M96 766 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 AGBL1Q96MI9 1066 aa14.41□□□□□ -0.1
CCDC40-210ENST00000573903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCDC40-210ENST00000573903 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-210ENST00000573903 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-210ENST00000573903 ARVCFO00192 962 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 ADCY6O43306 1168 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 ZEB2O60315 1214 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 FOSL2P15408 326 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 EPHB4P54760 987 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 MFSD5Q6N075 450 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 TMEM199Q8N511 208 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 MYLIPQ8WY64 445 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 AP5M1Q9H0R1 490 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 HELLSQ9NRZ9 838 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 TBX21Q9UL17 535 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 CCPG1Q9ULG6 757 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 PRR12Q9ULL5 1215 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 LRRC37A2A6NM11 1700 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 ZNF536O15090 1300 aa14.4□□□□□ -0.1
CCDC40-210ENST00000573903 CABYRO75952 493 aa14.39□□□□□ -0.11
CCDC40-210ENST00000573903 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
CCDC40-210ENST00000573903 TLK2Q86UE8 772 aa14.39□□□□□ -0.11
CCDC40-210ENST00000573903 TTYH1Q9H313 450 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-210ENST00000573903 ANAPC4Q9UJX5 808 aa14.39□□□□□ -0.11
CCDC40-210ENST00000573903 SOWAHBA6NEL2 793 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 ORC4O43929 436 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 NMT2O60551 498 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 CDK7P50613 346 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-210ENST00000573903 BEX3Q00994 111 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 255.6 ms