RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 FBXO40Q9UH90 709 aa20.57■□□□□ 0.88
SMG6-214ENST00000573827 ZMYND8Q9ULU4 1186 aaPredicted RBP20.57■□□□□ 0.88
SMG6-214ENST00000573827 ASTN1O14525 1302 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 MCM3APO60318 1980 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 SNAP25P60880 206 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 LRRC41Q15345 812 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 FAM133AQ8N9E0 248 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 TTC14Q96N46 770 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 KATNBL1Q9H079 304 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 TOMM22Q9NS69 142 aa20.56■□□□□ 0.88
SMG6-214ENST00000573827 PDHBP11177 359 aa20.55■□□□□ 0.88
SMG6-214ENST00000573827 ARRDC4Q8NCT1 418 aa20.55■□□□□ 0.88
SMG6-214ENST00000573827 LENG1Q96BZ8 264 aaPredicted RBP20.55■□□□□ 0.88
SMG6-214ENST00000573827 DDX11Q96FC9 970 aa20.55■□□□□ 0.88
SMG6-214ENST00000573827 SENP6Q9GZR1 1112 aaPredicted RBP20.55■□□□□ 0.88
SMG6-214ENST00000573827 RANBP17Q9H2T7 1088 aaKnown RBP20.55■□□□□ 0.88
SMG6-214ENST00000573827 RNF41Q9H4P4 317 aaPredicted RBP20.55■□□□□ 0.88
SMG6-214ENST00000573827 A1CFQ9NQ94 594 aaKnown RBP20.55■□□□□ 0.88
SMG6-214ENST00000573827 RNF146Q9NTX7 359 aa20.55■□□□□ 0.88
SMG6-214ENST00000573827 ZNF213O14771 459 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 ADCY6O43306 1168 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 SLC4A3P48751 1232 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 CNTN2Q02246 1040 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 SNX17Q15036 470 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 TKFCQ3LXA3 575 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 ANKS1AQ92625 1134 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 ACAD9Q9H845 621 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 HOMER2Q9NSB8 354 aa20.54■□□□□ 0.88
SMG6-214ENST00000573827 LCTP09848 1927 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 SOWAHBA6NEL2 793 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 ADAMTS4O75173 837 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 SYN1P17600 705 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 BMP8BP34820 402 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 SLC16A2P36021 539 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 NT5C2P49902 561 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 ZNF543Q08ER8 600 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 MUM1L1Q5H9M0 696 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 CCDC174Q6PII3 467 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 ANKRD35Q8N283 1001 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 ESR2Q92731 530 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
SMG6-214ENST00000573827 CTDP1Q9Y5B0 961 aaPredicted RBP20.53■□□□□ 0.88
SMG6-214ENST00000573827 A0A1W2PPC1 479 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 ICAM1P05362 532 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 AKR1A1P14550 325 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 CHMLP26374 656 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 MAGEA10P43363 369 aaPredicted RBP20.52■□□□□ 0.88
SMG6-214ENST00000573827 CCDC96Q2M329 555 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 SYDE2Q5VT97 1194 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 DGKHQ86XP1 1220 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 TRERF1Q96PN7 1200 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.52■□□□□ 0.88
SMG6-214ENST00000573827 ISY1Q9ULR0 285 aaKnown RBP20.52■□□□□ 0.88
SMG6-214ENST00000573827 PHF24Q9UPV7 400 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 CNPY2Q9Y2B0 182 aa20.52■□□□□ 0.88
SMG6-214ENST00000573827 FRMPD2Q68DX3 1309 aaPredicted RBP20.52■□□□□ 0.87
SMG6-214ENST00000573827 KDM4AO75164 1064 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 PGK1P00558 417 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 RARBP10826 455 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 ATN1P54259 1190 aaPredicted RBP20.51■□□□□ 0.87
SMG6-214ENST00000573827 IKQ13123 557 aaPredicted RBP20.51■□□□□ 0.87
SMG6-214ENST00000573827 CCSAPQ6IQ19 270 aaPredicted RBP20.51■□□□□ 0.87
SMG6-214ENST00000573827 ARMCX2Q7L311 632 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 ZKSCAN3Q9BRR0 538 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 XPNPEP3Q9NQH7 507 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 RAD50Q92878 1312 aa20.51■□□□□ 0.87
SMG6-214ENST00000573827 B4E1Z4 1266 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 ALAS1P13196 640 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 ADCYAP1R1P41586 468 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 RTP1P59025 263 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 ACVR2BQ13705 512 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 C1orf53Q5VUE5 145 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 SLC39A5Q6ZMH5 540 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 CCDC144CPQ8IYA2 1237 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 ENAHQ8N8S7 591 aaPredicted RBP20.5■□□□□ 0.87
SMG6-214ENST00000573827 KLHDC9Q8NEP7 349 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 GPCPD1Q9NPB8 672 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 CYP39A1Q9NYL5 469 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 ZSWIM5Q9P217 1185 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
SMG6-214ENST00000573827 COL6A3P12111 3177 aa20.5■□□□□ 0.87
SMG6-214ENST00000573827 KBTBD13C9JR72 458 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 POTEB2H3BUK9 544 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 PTH1RQ03431 593 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 IMMTQ16891 758 aaKnown RBP20.49■□□□□ 0.87
SMG6-214ENST00000573827 ABHD16BQ9H3Z7 469 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 CTNNA3Q9UI47 895 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 CCPG1Q9ULG6 757 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 TAF6LQ9Y6J9 622 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 LRRC37A2A6NM11 1700 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 SYNRGQ9UMZ2 1314 aa20.49■□□□□ 0.87
SMG6-214ENST00000573827 SOX1O00570 391 aaPredicted RBP20.48■□□□□ 0.87
SMG6-214ENST00000573827 CTAGE5O15320 804 aa20.48■□□□□ 0.87
SMG6-214ENST00000573827 IRX5P78411 483 aaPredicted RBP20.48■□□□□ 0.87
SMG6-214ENST00000573827 MORC4Q8TE76 937 aa20.48■□□□□ 0.87
SMG6-214ENST00000573827 CLEC4DQ8WXI8 215 aa20.48■□□□□ 0.87
SMG6-214ENST00000573827 PURBQ96QR8 312 aaKnown RBP20.48■□□□□ 0.87
SMG6-214ENST00000573827 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
SMG6-214ENST00000573827 ZHX1Q9UKY1 873 aaPredicted RBP20.48■□□□□ 0.87
SMG6-214ENST00000573827 FAM184BQ9ULE4 1060 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms