RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 STK11IPQ8N1F8 1099 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 ANKRD35Q8N283 1001 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 C1QTNF1Q9BXJ1 281 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 HIPK3Q9H422 1215 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 ATP8A2Q9NTI2 1148 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 RIPK3Q9Y572 518 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 ZBBXA8MT70 800 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 MYOGP15173 224 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 GJA9P57773 515 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 MAMDC4Q6UXC1 1216 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 C16orf86Q6ZW13 317 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
PRPF8-208ENST00000573716 ABHD16BQ9H3Z7 469 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 UMODL1Q5DID0 1318 aa14.65□□□□□ -0.06
PRPF8-208ENST00000573716 DNAJC25-GNG10A0A024R161 153 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 ZBED4O75132 1171 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
PRPF8-208ENST00000573716 KCNQ1P51787 676 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 CXCL17Q6UXB2 119 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 ARMCX2Q7L311 632 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 KIFC2Q96AC6 838 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 RAVER2Q9HCJ3 691 aaKnown RBP14.64□□□□□ -0.07
PRPF8-208ENST00000573716 HOMER2Q9NSB8 354 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 ISY1Q9ULR0 285 aaKnown RBP14.64□□□□□ -0.07
PRPF8-208ENST00000573716 SLC4A7Q9Y6M7 1214 aa14.64□□□□□ -0.07
PRPF8-208ENST00000573716 BMP1P13497 986 aa14.63□□□□□ -0.07
PRPF8-208ENST00000573716 AAK1Q2M2I8 961 aa14.63□□□□□ -0.07
PRPF8-208ENST00000573716 CEP85Q6P2H3 762 aa14.63□□□□□ -0.07
PRPF8-208ENST00000573716 ZNF467Q7Z7K2 595 aaPredicted RBP14.63□□□□□ -0.07
PRPF8-208ENST00000573716 PRPF38AQ8NAV1 312 aaKnown RBP14.63□□□□□ -0.07
PRPF8-208ENST00000573716 RHPN1Q8TCX5 695 aa14.63□□□□□ -0.07
PRPF8-208ENST00000573716 SLC4A4Q9Y6R1 1079 aa14.63□□□□□ -0.07
PRPF8-208ENST00000573716 MYH4Q9Y623 1939 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 NDUFB10O96000 172 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 CD4P01730 458 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 ADD2P35612 726 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 TNFAIP2Q03169 654 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 CCDC144CPQ8IYA2 1237 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 CLASRPQ8N2M8 674 aaKnown RBP14.62□□□□□ -0.07
PRPF8-208ENST00000573716 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.62□□□□□ -0.075e-6■■□□□ 11.5
PRPF8-208ENST00000573716 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 TRPV6Q9H1D0 765 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 CERS4Q9HA82 394 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 PAG1Q9NWQ8 432 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 HCN4Q9Y3Q4 1203 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 MYH7P12883 1935 aa14.62□□□□□ -0.07
PRPF8-208ENST00000573716 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
PRPF8-208ENST00000573716 F5H6K3 240 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 RFXAPO00287 272 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 CTAGE5O15320 804 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 GTPBP6O43824 516 aaPredicted RBP14.61□□□□□ -0.07
PRPF8-208ENST00000573716 CHGBP05060 677 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 RLBP1P12271 317 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 ATP2A2P16615 1042 aaKnown RBP14.61□□□□□ -0.07
PRPF8-208ENST00000573716 CNTN2Q02246 1040 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 KLRC3Q07444 240 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 ITGA7Q13683 1181 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 HSP90AB4PQ58FF6 505 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 CTR9Q6PD62 1173 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 SCLYQ96I15 445 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 FGD4Q96M96 766 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 NOC4LQ9BVI4 516 aaKnown RBP14.61□□□□□ -0.07
PRPF8-208ENST00000573716 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 PCDHA11Q9Y5I1 949 aa14.61□□□□□ -0.07
PRPF8-208ENST00000573716 PRRC2BQ5JSZ5 2229 aaKnown RBP14.6□□□□□ -0.07
PRPF8-208ENST00000573716 PTGS1P23219 599 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 PSMC6P62333 389 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 FSCN1Q16658 493 aaKnown RBP14.6□□□□□ -0.07
PRPF8-208ENST00000573716 TLK2Q86UE8 772 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 RPUSD2Q8IZ73 545 aaKnown RBP14.6□□□□□ -0.07
PRPF8-208ENST00000573716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF8-208ENST00000573716 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.6□□□□□ -0.07
PRPF8-208ENST00000573716 EPHX3Q9H6B9 360 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 FBXO40Q9UH90 709 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 CHD7Q9P2D1 2997 aa14.6□□□□□ -0.07
PRPF8-208ENST00000573716 GREB1LQ9C091 1923 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-208ENST00000573716 MINDY4BA8MYZ0 360 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 DYNC1LI2O43237 492 aaPredicted RBP14.59□□□□□ -0.07
PRPF8-208ENST00000573716 ZEB2O60315 1214 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 B4GALT4O60513 344 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 CABYRO75952 493 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 DEFB128Q7Z7B8 93 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 CHMP4CQ96CF2 233 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 LRFN3Q9BTN0 628 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 WNT8AQ9H1J5 351 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 ASTN1O14525 1302 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 REV3LO60673 3130 aa14.59□□□□□ -0.07
PRPF8-208ENST00000573716 LRRC37A2A6NM11 1700 aa14.58□□□□□ -0.07
PRPF8-208ENST00000573716 ATP2A1O14983 1001 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 ERC2O15083 957 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 CA3P07451 260 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 RASA1P20936 1047 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 TMEM67Q5HYA8 995 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 TMEM31Q5JXX7 168 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 KRT40Q6A162 431 aa14.58□□□□□ -0.08
PRPF8-208ENST00000573716 SLC43A3Q8NBI5 491 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms