RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 RHOBTB3O94955 611 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 MYL1P05976 194 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 TRIM21P19474 475 aaKnown RBP17.53■□□□□ 0.4
NUP88-207ENST00000573584 TYW1BQ6NUM6 668 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 FBXO33Q7Z6M2 555 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 STAG2Q8N3U4 1231 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 EEF2KMTQ96G04 330 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 MED4Q9NPJ6 270 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 AGPAT5Q9NUQ2 364 aa17.53■□□□□ 0.4
NUP88-207ENST00000573584 FEZ2Q9UHY8 353 aaPredicted RBP17.53■□□□□ 0.4
NUP88-207ENST00000573584 KRT86O43790 486 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 ADAMTS2O95450 1211 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 KLRK1P26718 216 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
NUP88-207ENST00000573584 PAPD7Q5XG87 772 aaKnown RBP17.52■□□□□ 0.4
NUP88-207ENST00000573584 TTI2Q6NXR4 508 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 CSGALNACT2Q8N6G5 542 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 CAPZA3Q96KX2 299 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 TUBGCP2Q9BSJ2 902 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 KBTBD4Q9NVX7 518 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 ZNHIT6Q9NWK9 470 aaKnown RBP17.52■□□□□ 0.4
NUP88-207ENST00000573584 SRGNP10124 158 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 TFAP4Q01664 338 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 INF2Q27J81 1249 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 SBK1Q52WX2 424 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 PNMA1Q8ND90 353 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 EHBP1Q8NDI1 1231 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 CELF1Q92879 486 aaKnown RBP17.52■□□□□ 0.4
NUP88-207ENST00000573584 JAKMIP2Q96AA8 810 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 EXOC1Q9NV70 894 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 MCM9Q9NXL9 1143 aa17.52■□□□□ 0.4
NUP88-207ENST00000573584 MCM3P25205 808 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 PRDX5P30044 214 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 CYLC1P35663 651 aaPredicted RBP17.51■□□□□ 0.39
NUP88-207ENST00000573584 MEA1Q16626 185 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
NUP88-207ENST00000573584 CCSER1Q9C0I3 900 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 PCDHA6Q9UN73 950 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 PCDHA8Q9Y5H6 950 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 M0R2N6 131 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
NUP88-207ENST00000573584 TBC1D8BQ0IIM8 1120 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
NUP88-207ENST00000573584 PODXL2Q9NZ53 605 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 ZNF662Q6ZS27 426 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 DGKHQ86XP1 1220 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 NUP58Q9BVL2 599 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 LACRTQ9GZZ8 138 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 VIPAS39Q9H9C1 493 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
NUP88-207ENST00000573584 IL17RBQ9NRM6 502 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 TFCP2L1Q9NZI6 479 aa17.51■□□□□ 0.39
NUP88-207ENST00000573584 IVLP07476 585 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 USP17L8P0C7I0 530 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 TNNT3P45378 269 aaPredicted RBP17.5■□□□□ 0.39
NUP88-207ENST00000573584 MAP9Q49MG5 647 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 PCMTD1Q96MG8 357 aaPredicted RBP17.5■□□□□ 0.39
NUP88-207ENST00000573584 DUSP9Q99956 384 aaKnown RBP17.5■□□□□ 0.39
NUP88-207ENST00000573584 LCMT1Q9UIC8 334 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 RCCD1A6NED2 376 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 HIBADHP31937 336 aaKnown RBP17.5■□□□□ 0.39
NUP88-207ENST00000573584 KLK7P49862 253 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 CKAP4Q07065 602 aaKnown RBP17.5■□□□□ 0.39
NUP88-207ENST00000573584 SEMA3FQ13275 785 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 HEATR3Q7Z4Q2 680 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 RPGRIP1Q96KN7 1286 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 TTYH3Q9C0H2 523 aa17.5■□□□□ 0.39
NUP88-207ENST00000573584 ZNF335Q9H4Z2 1342 aaPredicted RBP17.5■□□□□ 0.39
NUP88-207ENST00000573584 PHLPP1O60346 1717 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 GTF2E1P29083 439 aaPredicted RBP17.49■□□□□ 0.39
NUP88-207ENST00000573584 SLC20A2Q08357 652 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 LRRC15Q8TF66 581 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
NUP88-207ENST00000573584 FAM204AQ9H8W3 233 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 RASSF10A6NK89 507 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 MYO1CO00159 1063 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 ZBED6P86452 979 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 CCDC170Q8IYT3 715 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 DUSP10Q9Y6W6 482 aa17.49■□□□□ 0.39
NUP88-207ENST00000573584 MYH13Q9UKX3 1938 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 TARSL2A2RTX5 802 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 EIF3CLB5ME19 914 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 GNAQP50148 359 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 ANKRD40Q6AI12 368 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 CLEC4GQ6UXB4 293 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 CAGE1Q8TC20 777 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 P2RX5Q93086 422 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 EIF3CQ99613 913 aaKnown RBP17.48■□□□□ 0.39
NUP88-207ENST00000573584 TCP11L1Q9NUJ3 509 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 MAD2L2Q9UI95 211 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 JAG2Q9Y219 1238 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 BICDL2A1A5D9 508 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 LAD1O00515 517 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 ZMYND10O75800 440 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 PLCG1P19174 1290 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 CCNE1P24864 410 aa17.48■□□□□ 0.39
NUP88-207ENST00000573584 MTIF2P46199 727 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms