RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CHST13Q8NET6 341 aa20.44■□□□□ 0.86
SMG6-212ENST00000573153 DCAF4Q8WV16 495 aa20.44■□□□□ 0.86
SMG6-212ENST00000573153 LENG1Q96BZ8 264 aaPredicted RBP20.44■□□□□ 0.86
SMG6-212ENST00000573153 RANBP17Q9H2T7 1088 aaKnown RBP20.44■□□□□ 0.86
SMG6-212ENST00000573153 A1CFQ9NQ94 594 aaKnown RBP20.44■□□□□ 0.86
SMG6-212ENST00000573153 ZMYND8Q9ULU4 1186 aaPredicted RBP20.44■□□□□ 0.86
SMG6-212ENST00000573153 MCM3APO60318 1980 aa20.44■□□□□ 0.86
SMG6-212ENST00000573153 GJC2Q5T442 439 aaPredicted RBP20.43■□□□□ 0.86
SMG6-212ENST00000573153 MSL3Q8N5Y2 521 aaKnown RBP20.43■□□□□ 0.86
SMG6-212ENST00000573153 CHURC1Q8WUH1 139 aa20.43■□□□□ 0.86
SMG6-212ENST00000573153 SYNGAP1Q96PV0 1343 aa20.43■□□□□ 0.86
SMG6-212ENST00000573153 LTBP2Q14767 1821 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 ADAMTS4O75173 837 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 NT5C2P49902 561 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 SNX17Q15036 470 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 LRRC41Q15345 812 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 MUM1L1Q5H9M0 696 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 MFSD6Q6ZSS7 791 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 RNF146Q9NTX7 359 aa20.42■□□□□ 0.86
SMG6-212ENST00000573153 SOWAHBA6NEL2 793 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 SYN1P17600 705 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 CHMLP26374 656 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 SLC16A2P36021 539 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 CNTN2Q02246 1040 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 ANKS1AQ92625 1134 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 TTC14Q96N46 770 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 SENP6Q9GZR1 1112 aaPredicted RBP20.41■□□□□ 0.86
SMG6-212ENST00000573153 TOMM22Q9NS69 142 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 HOMER2Q9NSB8 354 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 FBXO40Q9UH90 709 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 TAF6LQ9Y6J9 622 aa20.41■□□□□ 0.86
SMG6-212ENST00000573153 FRMPD2Q68DX3 1309 aaPredicted RBP20.41■□□□□ 0.86
SMG6-212ENST00000573153 ZNF213O14771 459 aa20.4■□□□□ 0.86
SMG6-212ENST00000573153 ZNF543Q08ER8 600 aa20.4■□□□□ 0.86
SMG6-212ENST00000573153 CCSAPQ6IQ19 270 aaPredicted RBP20.4■□□□□ 0.86
SMG6-212ENST00000573153 RAD50Q92878 1312 aa20.4■□□□□ 0.86
SMG6-212ENST00000573153 ZKSCAN3Q9BRR0 538 aa20.4■□□□□ 0.86
SMG6-212ENST00000573153 RNF41Q9H4P4 317 aaPredicted RBP20.4■□□□□ 0.86
SMG6-212ENST00000573153 ACAD9Q9H845 621 aa20.4■□□□□ 0.86
SMG6-212ENST00000573153 MTMR7Q9Y216 660 aa20.4■□□□□ 0.86
SMG6-212ENST00000573153 DDX49Q9Y6V7 483 aaKnown RBP20.4■□□□□ 0.86
SMG6-212ENST00000573153 KDM4AO75164 1064 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 SLC4A3P48751 1232 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 IRX5P78411 483 aaPredicted RBP20.39■□□□□ 0.85
SMG6-212ENST00000573153 PTH1RQ03431 593 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 TKFCQ3LXA3 575 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 CCDC174Q6PII3 467 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 DGKHQ86XP1 1220 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 DDX11Q96FC9 970 aa20.39■□□□□ 0.85
SMG6-212ENST00000573153 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.39■□□□□ 0.85
SMG6-212ENST00000573153 B4E1Z4 1266 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 ICAM1P05362 532 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 AKR1A1P14550 325 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 BMP8BP34820 402 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 CCDC96Q2M329 555 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 SYDE2Q5VT97 1194 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 ARMCX2Q7L311 632 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 ANKRD35Q8N283 1001 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 ENAHQ8N8S7 591 aaPredicted RBP20.38■□□□□ 0.85
SMG6-212ENST00000573153 ESR2Q92731 530 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 TRERF1Q96PN7 1200 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 PURBQ96QR8 312 aaKnown RBP20.38■□□□□ 0.85
SMG6-212ENST00000573153 ZSWIM5Q9P217 1185 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 PHF24Q9UPV7 400 aa20.38■□□□□ 0.85
SMG6-212ENST00000573153 SYNRGQ9UMZ2 1314 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 MYADML2A6NDP7 307 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 SOX1O00570 391 aaPredicted RBP20.37■□□□□ 0.85
SMG6-212ENST00000573153 CTAGE5O15320 804 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 PGK1P00558 417 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 MAGEA10P43363 369 aaPredicted RBP20.37■□□□□ 0.85
SMG6-212ENST00000573153 ATN1P54259 1190 aaPredicted RBP20.37■□□□□ 0.85
SMG6-212ENST00000573153 CCDC144CPQ8IYA2 1237 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 ARRDC4Q8NCT1 418 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 KLHDC9Q8NEP7 349 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 CLEC4DQ8WXI8 215 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 CPVLQ9H3G5 476 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 GPCPD1Q9NPB8 672 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 XPNPEP3Q9NQH7 507 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 CYP39A1Q9NYL5 469 aa20.37■□□□□ 0.85
SMG6-212ENST00000573153 A0A1W2PPC1 479 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 SGSM2O43147 1006 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 ALAS1P13196 640 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 RTP1P59025 263 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 NKX3-2P78367 333 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 IKQ13123 557 aaPredicted RBP20.36■□□□□ 0.85
SMG6-212ENST00000573153 ACVR2BQ13705 512 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 SEC23AQ15436 765 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 C1orf53Q5VUE5 145 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 SLC39A5Q6ZMH5 540 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 MORC4Q8TE76 937 aa20.36■□□□□ 0.85
SMG6-212ENST00000573153 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
SMG6-212ENST00000573153 NFIBO00712 420 aa20.35■□□□□ 0.85
SMG6-212ENST00000573153 CYP21A2P08686 494 aa20.35■□□□□ 0.85
SMG6-212ENST00000573153 RARBP10826 455 aa20.35■□□□□ 0.85
SMG6-212ENST00000573153 ADCYAP1R1P41586 468 aa20.35■□□□□ 0.85
SMG6-212ENST00000573153 CYB5R4Q7L1T6 521 aa20.35■□□□□ 0.85
SMG6-212ENST00000573153 ZHX1Q9UKY1 873 aaPredicted RBP20.35■□□□□ 0.85
SMG6-212ENST00000573153 CCPG1Q9ULG6 757 aa20.35■□□□□ 0.85
SMG6-212ENST00000573153 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms