RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 A0A0U1RQG5 324 aaPredicted RBP19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 PPIGQ13427 754 aaKnown RBP eCLIP19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 GIMAP6Q6P9H5 292 aa19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 CCDC129Q6ZRS4 1044 aa19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 ZNF444Q8N0Y2 327 aaPredicted RBP19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 ABHD16BQ9H3Z7 469 aa19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 FEM1BQ9UK73 627 aa19.17■□□□□ 0.66
HCFC1R1-203ENST00000572355 GPAA1O43292 621 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 APPP05067 770 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 CSF2RAP15509 400 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 GJA9P57773 515 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 GNASQ5JWF2 1037 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 CHST13Q8NET6 341 aa19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 SYMPKQ92797 1274 aaKnown RBP19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 UPF3AQ9H1J1 476 aaKnown RBP19.16■□□□□ 0.66
HCFC1R1-203ENST00000572355 GRXCR1A8MXD5 290 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 M0R2C6 588 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 ARVCFO00192 962 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 TLR3O15455 904 aaKnown RBP19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 TTLL1O95922 423 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 ACRP10323 421 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 PBX2P40425 430 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 CDK7P50613 346 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 CNTN2Q02246 1040 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 TMEM240Q5SV17 173 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 TMEM199Q8N511 208 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 GPATCH3Q96I76 525 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 ZNF287Q9HBT7 754 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 MTMR4Q9NYA4 1195 aa19.15■□□□□ 0.66
HCFC1R1-203ENST00000572355 SPTBN5Q9NRC6 3674 aaKnown RBP19.14■□□□□ 0.66
HCFC1R1-203ENST00000572355 GBF1Q92538 1859 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 RNF113AO15541 343 aaKnown RBP19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 BMP3P12645 472 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 GNAT2P19087 354 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 OAZ1P54368 228 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 BEX3Q00994 111 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 C16orf59Q7L2K0 433 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 FAM126BQ8IXS8 530 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 PPM1EQ8WY54 764 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 CHMP4CQ96CF2 233 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 GAS2L1Q99501 681 aaPredicted RBP19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 PBX4Q9BYU1 374 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 PRDM6Q9NQX0 595 aa19.14■□□□□ 0.65
HCFC1R1-203ENST00000572355 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 TMEM232C9JQI7 657 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 TSPY3P0CV98 308 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 TSPY8P0CW00 308 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 IKQ13123 557 aaPredicted RBP19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 C20orf194Q5TEA3 1177 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 SLFN13Q68D06 897 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 PSRC1Q6PGN9 363 aaPredicted RBP19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 MKL1Q969V6 931 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 KATNBL1Q9H079 304 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 ACAD9Q9H845 621 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 PLIN4Q96Q06 1357 aa19.13■□□□□ 0.65
HCFC1R1-203ENST00000572355 CTAGE5O15320 804 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 ZFYP08048 801 aaPredicted RBP19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 STAT2P52630 851 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 TJAP1Q5JTD0 557 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 ZNF365Q70YC5 407 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 PRDM12Q9H4Q4 367 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 RNF146Q9NTX7 359 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 SYNPO2Q9UMS6 1093 aa19.12■□□□□ 0.65
HCFC1R1-203ENST00000572355 CYP2C18P33260 490 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 TNFAIP2Q03169 654 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 RASIP1Q5U651 963 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 CXCL17Q6UXB2 119 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 TLK2Q86UE8 772 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 FAM133AQ8N9E0 248 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 AGBL1Q96MI9 1066 aa19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 A1CFQ9NQ94 594 aaKnown RBP19.11■□□□□ 0.65
HCFC1R1-203ENST00000572355 ASTN1O14525 1302 aa19.1■□□□□ 0.65
HCFC1R1-203ENST00000572355 PTGS1P23219 599 aa19.1■□□□□ 0.65
HCFC1R1-203ENST00000572355 PDE4BQ07343 736 aa19.1■□□□□ 0.65
HCFC1R1-203ENST00000572355 NEDD1Q8NHV4 660 aa19.1■□□□□ 0.65
HCFC1R1-203ENST00000572355 DDX49Q9Y6V7 483 aaKnown RBP19.1■□□□□ 0.65
HCFC1R1-203ENST00000572355 LCTP09848 1927 aa19.1■□□□□ 0.65
HCFC1R1-203ENST00000572355 ZNF536O15090 1300 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 UMODL1Q5DID0 1318 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 SOWAHBA6NEL2 793 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 PATL2C9JE40 543 aaKnown RBP19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 CD4P01730 458 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 FDX1P10109 184 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 ALAS1P13196 640 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 SLC1A4P43007 532 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 TFAP4Q01664 338 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 FAM160B2Q86V87 743 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 SEC62Q99442 399 aaKnown RBP19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 NACAP1Q9BZK3 213 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 NAPBQ9H115 298 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 HIPK3Q9H422 1215 aa19.09■□□□□ 0.65
HCFC1R1-203ENST00000572355 IL23AQ9NPF7 189 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms