RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 CCDC12Q8WUD4 166 aaPredicted RBP22.29■■□□□ 1.16
SPNS2-203ENST00000570979 NR5A1Q13285 461 aa22.28■■□□□ 1.16
SPNS2-203ENST00000570979 LDLRAD1Q5T700 205 aa22.28■■□□□ 1.16
SPNS2-203ENST00000570979 ARMC9Q7Z3E5 817 aa22.28■■□□□ 1.16
SPNS2-203ENST00000570979 CDAN1Q8IWY9 1227 aa22.28■■□□□ 1.16
SPNS2-203ENST00000570979 PPP2R3BQ9Y5P8 575 aa22.28■■□□□ 1.16
SPNS2-203ENST00000570979 MKRN3Q13064 507 aaKnown RBP22.27■■□□□ 1.16
SPNS2-203ENST00000570979 NOLC1Q14978 699 aaKnown RBP eCLIP22.27■■□□□ 1.16
SPNS2-203ENST00000570979 NEDD1Q8NHV4 660 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 RNF186Q9NXI6 227 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 IMPACTQ9P2X3 320 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 SMC2O95347 1197 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 GSDMDP57764 484 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 MAPKAPK5Q8IW41 473 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 AOPEPQ8N6M6 819 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 SPC24Q8NBT2 197 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 PCDHB6Q9Y5E3 794 aa22.27■■□□□ 1.16
SPNS2-203ENST00000570979 TCP10L2B9ZVM9 353 aa22.26■■□□□ 1.15
SPNS2-203ENST00000570979 TRPA1O75762 1119 aa22.26■■□□□ 1.15
SPNS2-203ENST00000570979 CLIC6Q96NY7 704 aa22.26■■□□□ 1.15
SPNS2-203ENST00000570979 SPTLC3Q9NUV7 552 aa22.26■■□□□ 1.15
SPNS2-203ENST00000570979 SMIM22K7EJ46 135 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 CBFA2T2O43439 604 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 NRDCO43847 1150 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 RASA1P20936 1047 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 CDK8P49336 464 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 HDLBPQ00341 1268 aaKnown RBP22.25■■□□□ 1.15
SPNS2-203ENST00000570979 TTC38Q5R3I4 469 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 UTP14CQ5TAP6 766 aaKnown RBP22.25■■□□□ 1.15
SPNS2-203ENST00000570979 OXER1Q8TDS5 423 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 TTC12Q9H892 705 aaPredicted RBP22.25■■□□□ 1.15
SPNS2-203ENST00000570979 IL17RBQ9NRM6 502 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 NMT2O60551 498 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 TOP1P11387 765 aaKnown RBP22.25■■□□□ 1.15
SPNS2-203ENST00000570979 CACNB3P54284 484 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 ARL6IP4Q66PJ3 421 aaKnown RBP22.25■■□□□ 1.15
SPNS2-203ENST00000570979 MLKLQ8NB16 471 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 KIAA1524Q8TCG1 905 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 TNFRSF25Q93038 417 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 TEKT1Q969V4 418 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 CLMNQ96JQ2 1002 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 TEPSINQ96N21 525 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 SWAP70Q9UH65 585 aa22.25■■□□□ 1.15
SPNS2-203ENST00000570979 FLT1P17948 1338 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 RHBDL3P58872 404 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 DPCR1Q3MIW9 517 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 NT5DC1Q5TFE4 455 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 APOBEC3HQ6NTF7 200 aaKnown RBP22.24■■□□□ 1.15
SPNS2-203ENST00000570979 CCDC186Q7Z3E2 898 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 DAGLBQ8NCG7 672 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 TMEM39BQ9GZU3 492 aa22.24■■□□□ 1.15
SPNS2-203ENST00000570979 hCG_1984214I3L0E3 225 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 POSTNQ15063 836 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 SUPT20HL1Q3ZLR7 823 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 LONRF3Q496Y0 759 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 HHIPL2Q6UWX4 724 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 BLIDQ8IZY5 108 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 ZNF713Q8N859 430 aaPredicted RBP22.23■■□□□ 1.15
SPNS2-203ENST00000570979 DYNLL2Q96FJ2 89 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 ZDHHC15Q96MV8 337 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 SPZ1Q9BXG8 430 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 SAGE1Q9NXZ1 904 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 PCDHA4Q9UN74 947 aa22.23■■□□□ 1.15
SPNS2-203ENST00000570979 PALM3A6NDB9 673 aaPredicted RBP22.22■■□□□ 1.15
SPNS2-203ENST00000570979 USP2O75604 605 aaPredicted RBP22.22■■□□□ 1.15
SPNS2-203ENST00000570979 MYL5Q02045 173 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 DNTTIP2Q5QJE6 756 aaKnown RBP22.22■■□□□ 1.15
SPNS2-203ENST00000570979 SMARCE1Q969G3 411 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 STX8Q9UNK0 236 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 DYNC1I1O14576 645 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 POLR2DO15514 142 aaKnown RBP22.22■■□□□ 1.15
SPNS2-203ENST00000570979 PPP1R12BO60237 982 aaPredicted RBP22.22■■□□□ 1.15
SPNS2-203ENST00000570979 PLCD1P51178 756 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 ATP2C1P98194 919 aaPredicted RBP22.22■■□□□ 1.15
SPNS2-203ENST00000570979 TNFAIP1Q13829 316 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 TMEM47Q9BQJ4 181 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 MAD2L2Q9UI95 211 aa22.22■■□□□ 1.15
SPNS2-203ENST00000570979 LAD1O00515 517 aa22.21■■□□□ 1.15
SPNS2-203ENST00000570979 PARP1P09874 1014 aaKnown RBP22.21■■□□□ 1.15
SPNS2-203ENST00000570979 MDM2Q00987 491 aaPredicted RBP22.21■■□□□ 1.15
SPNS2-203ENST00000570979 SPRYD7Q5W111 196 aa22.21■■□□□ 1.15
SPNS2-203ENST00000570979 SAP30BPQ9UHR5 308 aaKnown RBP22.21■■□□□ 1.15
SPNS2-203ENST00000570979 ATP2B1P20020 1258 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 TXLNAP40222 546 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 NOVP48745 357 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 METTL16Q86W50 562 aaKnown RBP22.2■■□□□ 1.14
SPNS2-203ENST00000570979 PRIMPOLQ96LW4 560 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 CSRNP2Q9H175 543 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 DAGLAQ9Y4D2 1042 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 PCDHA5Q9Y5H7 936 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 PLIN4Q96Q06 1357 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 SLFN14P0C7P3 912 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 PTGS1P23219 599 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 GNA11P29992 359 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 PNOCQ13519 176 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 SLC10A4Q96EP9 437 aa22.2■■□□□ 1.14
SPNS2-203ENST00000570979 ZNF830Q96NB3 372 aaPredicted RBP22.2■■□□□ 1.14
SPNS2-203ENST00000570979 MYH1P12882 1939 aa22.19■■□□□ 1.14
SPNS2-203ENST00000570979 OTOFQ9HC10 1997 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms