RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 RANBP6O60518 1105 aaKnown RBP14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 PGK2P07205 417 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 COL6A1P12109 1028 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 BMP3P12645 472 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 NMIQ13287 307 aaPredicted RBP14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 ALX1Q15699 326 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 TOMM22Q9NS69 142 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 TRIOBPQ9H2D6 2365 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 ZMYM6O95789 1325 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 CCDC171Q6TFL3 1326 aa14.64□□□□□ -0.07
CTDNEP1-205ENST00000570828 SEPT4O43236 478 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 ORC4O43929 436 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 SLC1A4P43007 532 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 SLC4A3P48751 1232 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 FXR1P51114 621 aaKnown RBP eCLIP14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 STAT2P52630 851 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 IKQ13123 557 aaPredicted RBP14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 ZNF589Q86UQ0 364 aaPredicted RBP14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 PLEKHM2Q8IWE5 1019 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 GMCL1Q96IK5 515 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 OSBPL3Q9H4L5 887 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 SLC38A10Q9HBR0 1119 aa14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 SUPT16HQ9Y5B9 1047 aaKnown RBP14.63□□□□□ -0.07
CTDNEP1-205ENST00000570828 TMEM232C9JQI7 657 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 DNM1LO00429 736 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 ATP2A1O14983 1001 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 FGAP02671 866 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 HSPD1P10809 573 aaKnown RBP14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 OAZ1P54368 228 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 ZNF792Q3KQV3 632 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 TMEM92Q6UXU6 159 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 ARRDC4Q8NCT1 418 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 RAVER2Q9HCJ3 691 aaKnown RBP14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 INCENPQ9NQS7 918 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 DIAPH3Q9NSV4 1193 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 NRBP1Q9UHY1 535 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 ZMYND8Q9ULU4 1186 aaPredicted RBP14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 DIS3Q9Y2L1 958 aaKnown RBP14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 PARP14Q460N5 1801 aa14.62□□□□□ -0.07
CTDNEP1-205ENST00000570828 NMT2O60551 498 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 FDX1P10109 184 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 SDSP20132 328 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 MCCP23508 829 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 PRAMEF19Q5SWL8 479 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 GPR153Q6NV75 609 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 HOMEZQ8IX15 550 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 DDX11Q96FC9 970 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 TINF2Q9BSI4 451 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 SENP6Q9GZR1 1112 aaPredicted RBP14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 PRO3102Q9H379 93 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 IL17RBQ9NRM6 502 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 CNPY2Q9Y2B0 182 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 RIPK3Q9Y572 518 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
CTDNEP1-205ENST00000570828 KBTBD13C9JR72 458 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 HIP1O00291 1037 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 SYN1P17600 705 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 HAND2P61296 217 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 LRRC26Q2I0M4 334 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
CTDNEP1-205ENST00000570828 A0A1W2PPC1 479 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 FGRP09769 529 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 RARBP10826 455 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 PCP11498 1178 aaKnown RBP14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 CCDC96Q2M329 555 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 GJC2Q5T442 439 aaPredicted RBP14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 CWC27Q6UX04 472 aaKnown RBP14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 KCTD1Q719H9 257 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 ANKRD35Q8N283 1001 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 MSL3Q8N5Y2 521 aaKnown RBP14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 STAG1Q8WVM7 1258 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 RNF41Q9H4P4 317 aaPredicted RBP14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 TACC3Q9Y6A5 838 aa14.59□□□□□ -0.07
CTDNEP1-205ENST00000570828 COL11A1P12107 1806 aaPredicted RBP14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 PLA2G6O60733 806 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 AKR1A1P14550 325 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 AKNAD1Q5T1N1 836 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 MFSD6Q6ZSS7 791 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 RASGRP2Q7LDG7 609 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 DCAF4Q8WV16 495 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 ACAD9Q9H845 621 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 SYNGAP1Q96PV0 1343 aa14.58□□□□□ -0.08
CTDNEP1-205ENST00000570828 DNAH12Q6ZR08 3092 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 LAMA3Q16787 3333 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 MYH4Q9Y623 1939 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 DNAJC25-GNG10A0A024R161 153 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms