RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 MSL3Q8N5Y2 521 aaKnown RBP17.8■□□□□ 0.44
RAB40B-203ENST00000570676 CHST13Q8NET6 341 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 CHURC1Q8WUH1 139 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 SENP6Q9GZR1 1112 aaPredicted RBP17.8■□□□□ 0.44
RAB40B-203ENST00000570676 FBXO40Q9UH90 709 aa17.8■□□□□ 0.44
RAB40B-203ENST00000570676 A0A1W2PPC1 479 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 PCP11498 1178 aaKnown RBP17.79■□□□□ 0.44
RAB40B-203ENST00000570676 MAMDC4Q6UXC1 1216 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 ZNF467Q7Z7K2 595 aaPredicted RBP17.79■□□□□ 0.44
RAB40B-203ENST00000570676 DCAF4Q8WV16 495 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 RUFY2Q8WXA3 655 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 DDX11Q96FC9 970 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 AGBL1Q96MI9 1066 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 TMEM47Q9BQJ4 181 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 IL25Q9H293 177 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 PRR12Q9ULL5 1215 aa17.79■□□□□ 0.44
RAB40B-203ENST00000570676 KBTBD13C9JR72 458 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 SNAI1O95863 264 aaPredicted RBP17.78■□□□□ 0.44
RAB40B-203ENST00000570676 TOP1P11387 765 aaKnown RBP17.78■□□□□ 0.44
RAB40B-203ENST00000570676 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
RAB40B-203ENST00000570676 LRRC41Q15345 812 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 ARRDC4Q8NCT1 418 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 LENG1Q96BZ8 264 aaPredicted RBP17.78■□□□□ 0.44
RAB40B-203ENST00000570676 ACAD9Q9H845 621 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 HOMER2Q9NSB8 354 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 RNF146Q9NTX7 359 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 MTMR7Q9Y216 660 aa17.78■□□□□ 0.44
RAB40B-203ENST00000570676 AKR1A1P14550 325 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 BMP8BP34820 402 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 MAGEA10P43363 369 aaPredicted RBP17.77■□□□□ 0.44
RAB40B-203ENST00000570676 ATN1P54259 1190 aaPredicted RBP17.77■□□□□ 0.44
RAB40B-203ENST00000570676 SNX17Q15036 470 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 CCDC96Q2M329 555 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 BTNL9Q6UXG8 535 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 MFSD6Q6ZSS7 791 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 ANKRD35Q8N283 1001 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.44
RAB40B-203ENST00000570676 A1CFQ9NQ94 594 aaKnown RBP17.77■□□□□ 0.44
RAB40B-203ENST00000570676 XPNPEP3Q9NQH7 507 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
RAB40B-203ENST00000570676 ADAMTS4O75173 837 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 RARBP10826 455 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 RTP1P59025 263 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 SNAP25P60880 206 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 TKFCQ3LXA3 575 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 TTBK2Q6IQ55 1244 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 CCDC174Q6PII3 467 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 FAM133AQ8N9E0 248 aa17.76■□□□□ 0.43
RAB40B-203ENST00000570676 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
RAB40B-203ENST00000570676 FRMPD2Q68DX3 1309 aaPredicted RBP17.75■□□□□ 0.43
RAB40B-203ENST00000570676 RAD50Q92878 1312 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 SGSM2O43147 1006 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 ADCY6O43306 1168 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 PGK1P00558 417 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 SNHG28P0DPA3 235 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 PDHBP11177 359 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 ARMCX2Q7L311 632 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.75■□□□□ 0.43
RAB40B-203ENST00000570676 PHF24Q9UPV7 400 aa17.75■□□□□ 0.43
RAB40B-203ENST00000570676 ASTN1O14525 1302 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 SYNRGQ9UMZ2 1314 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 SOX1O00570 391 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-203ENST00000570676 ZNF213O14771 459 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-203ENST00000570676 ALAS1P13196 640 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 SLC16A2P36021 539 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 MUM1L1Q5H9M0 696 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 SYDE2Q5VT97 1194 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 SLC39A5Q6ZMH5 540 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 ESR2Q92731 530 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 TTC14Q96N46 770 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 TRERF1Q96PN7 1200 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 BACH2Q9BYV9 841 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 ZHX1Q9UKY1 873 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-203ENST00000570676 RANBP2P49792 3224 aaKnown RBP17.74■□□□□ 0.43
RAB40B-203ENST00000570676 MYH6P13533 1939 aa17.74■□□□□ 0.43
RAB40B-203ENST00000570676 SOWAHBA6NEL2 793 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 ICAM1P05362 532 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 ADCYAP1R1P41586 468 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 NT5C2P49902 561 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 ZNF543Q08ER8 600 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 CCDC144CPQ8IYA2 1237 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 GPCPD1Q9NPB8 672 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 CCPG1Q9ULG6 757 aa17.73■□□□□ 0.43
RAB40B-203ENST00000570676 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 EIF5BO60841 1220 aaKnown RBP17.72■□□□□ 0.43
RAB40B-203ENST00000570676 KDM4AO75164 1064 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 ACVR2BQ13705 512 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 KIAA1211Q6ZU35 1233 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 RNF180Q86T96 592 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 FERMT2Q96AC1 680 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 ABHD16BQ9H3Z7 469 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 CYP39A1Q9NYL5 469 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms