RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 ITGA7Q13683 1181 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 POLA2Q14181 598 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 FAM83BQ5T0W9 1011 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 EAF2Q96CJ1 260 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 KATNBL1Q9H079 304 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 GREB1LQ9C091 1923 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
CTDNEP1-202ENST00000570380 ASTN1O14525 1302 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 ANP32CO43423 234 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 B4GALT4O60513 344 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 TAP1Q03518 808 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 SNRNP48Q6IEG0 339 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 ARMCX2Q7L311 632 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 ARHGAP45Q92619 1136 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 TEX13BQ9BXU2 312 aa12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 TRIP12Q14669 1992 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-202ENST00000570380 LPXNO60711 386 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 SURF6O75683 361 aaKnown RBP12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 CABYRO75952 493 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 CT47B1P0C2W7 299 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 NHLH1Q02575 133 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 GRB10Q13322 594 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 SSH3Q8TE77 659 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 CCDC17Q96LX7 622 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
CTDNEP1-202ENST00000570380 TANC1Q9C0D5 1861 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 RAD21O60216 631 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 PDE6AP16499 860 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 PTGS1P23219 599 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 CDK8P49336 464 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 PSMC6P62333 389 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.391e-10■■■□□ 14.6
CTDNEP1-202ENST00000570380 SPRED2Q7Z698 418 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 CPXCR1Q8N123 301 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 LCORLQ8N3X6 602 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 NUP88Q99567 741 aaPredicted RBP12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 KANSL2Q9H9L4 492 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 GOPCQ9HD26 462 aa12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 GNEQ9Y223 722 aaKnown RBP12.61□□□□□ -0.39
CTDNEP1-202ENST00000570380 ZNF318Q5VUA4 2279 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 ATP2A1O14983 1001 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 BCAR3O75815 825 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 PFKMP08237 780 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 FSCN1Q16658 493 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 SLC9C2Q5TAH2 1124 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 NOL8Q76FK4 1167 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 ANKRD35Q8N283 1001 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 SIP14410 1827 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
CTDNEP1-202ENST00000570380 LCTP09848 1927 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 MYH7P12883 1935 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 TCRBV5S4A2TA0A5A2 114 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 PRKAB2O43741 272 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 TRIM27P14373 513 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 C12orf60Q5U649 245 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 GJD3Q8N144 294 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 PHOSPHO2Q8TCD6 241 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 FBXL18Q96ME1 805 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 UIMC1Q96RL1 719 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 SLC9A7Q96T83 725 aa12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 NOP58Q9Y2X3 529 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-202ENST00000570380 DYNC1LI2O43237 492 aaPredicted RBP12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 CYP2C9P11712 490 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 SMPD1P17405 629 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 CNTN2Q02246 1040 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 ARMT1Q9H993 441 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 RAVER2Q9HCJ3 691 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 TRMT13Q9NUP7 481 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 SCN10AQ9Y5Y9 1956 aa12.58□□□□□ -0.4
CTDNEP1-202ENST00000570380 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 ZEB2O60315 1214 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 ACTN1P12814 892 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 TTF1Q15361 905 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 TMEM63BQ5T3F8 832 aa12.57□□□□□ -0.4
CTDNEP1-202ENST00000570380 FAM133AQ8N9E0 248 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms