RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PPP1R11O60927 126 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 CETPP11597 493 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 MOGSQ13724 837 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 MCTP1Q6DN14 999 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 CCDC174Q6PII3 467 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 FERMT3Q86UX7 667 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 FBXO11Q86XK2 927 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 RGS22Q8NE09 1264 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 CCDC12Q8WUD4 166 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 SHISA4Q96DD7 197 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 ATG4CQ96DT6 458 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 CREBZFQ9NS37 354 aa17.76■□□□□ 0.43
HERPUD1-219ENST00000570273 CCL15-CCL14A0A0B4J2E2 113 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 ZBED4O75132 1171 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 F13A1P00488 732 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 MMP1P03956 469 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 DSG3P32926 999 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 NLRP5P59047 1200 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 IRX3P78415 501 aaPredicted RBP17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 PABPC4Q13310 644 aaKnown RBP eCLIP17.75■□□□□ 0.436e-14■■■□□ 18
HERPUD1-219ENST00000570273 CCL15Q16663 113 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 PPP1R18Q6NYC8 613 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 COA7Q96BR5 231 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 AMNQ9BXJ7 453 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 BRMS1Q9HCU9 246 aa17.75■□□□□ 0.43
HERPUD1-219ENST00000570273 MYPNQ86TC9 1320 aa17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 COG2Q14746 738 aa17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 USH1GQ495M9 461 aa17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 TYW1BQ6NUM6 668 aa17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 PHF20Q9BVI0 1012 aa17.74■□□□□ 0.43
HERPUD1-219ENST00000570273 SPDYE16A6NNV3 312 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 SLC10A3P09131 477 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 FDX1P10109 184 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 CALML3P27482 149 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 HOXA7P31268 230 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 TRAF1Q13077 416 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 RESTQ13127 1097 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 GPAT2Q6NUI2 795 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 PAXIP1Q6ZW49 1069 aaPredicted RBP17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 DIS3L2Q8IYB7 885 aaKnown RBP17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 BRI3BPQ8WY22 251 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 MS4A4AQ96JQ5 239 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 SLC38A10Q9HBR0 1119 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 PCDHA1Q9Y5I3 950 aa17.73■□□□□ 0.43
HERPUD1-219ENST00000570273 VWA5AO00534 786 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 TAL1P17542 331 aaPredicted RBP17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 OSBPP22059 807 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 KRT2P35908 639 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 HTRA3P83110 453 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 ASCC2Q9H1I8 757 aaPredicted RBP17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 C6orf50Q9HD87 102 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 HOXC10Q9NYD6 342 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 CCPG1Q9ULG6 757 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 ESYT2A0FGR8 921 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 ICAM1P05362 532 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 ADCY7P51828 1080 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 CPXCR1Q8N123 301 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 DNAJC5GQ8N7S2 189 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 TNPO1Q92973 898 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 PCDHA4Q9UN74 947 aa17.72■□□□□ 0.43
HERPUD1-219ENST00000570273 PCNTO95613 3336 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 SMCO2A6NFE2 343 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 BTBD19C9JJ37 291 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 GNA11P29992 359 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 NPY5RQ15761 445 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 GALNT17Q6IS24 598 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 ANKRD23Q86SG2 305 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 DAGLBQ8NCG7 672 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 OXER1Q8TDS5 423 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 CCDC102AQ96A19 550 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 HHIPL1Q96JK4 782 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 P2RX7Q99572 595 aaKnown RBP17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 ZMYND12Q9H0C1 365 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 ZSCAN16Q9H4T2 348 aaPredicted RBP17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 PNMA2Q9UL42 364 aa17.71■□□□□ 0.43
HERPUD1-219ENST00000570273 PARP14Q460N5 1801 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 ZNF536O15090 1300 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 ABCB11O95342 1321 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 MANSC4A6NHS7 340 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 RASSF10A6NK89 507 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 BTBD18B2RXH4 712 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 HERVK_113P62684 666 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 FOXD4L6Q3SYB3 417 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 FOXD4L3Q6VB84 417 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 BRAPQ7Z569 592 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 BLIDQ8IZY5 108 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 REPS2Q8NFH8 660 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 BICD2Q8TD16 824 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 AGBL1Q96MI9 1066 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 FOXP1Q9H334 677 aaPredicted RBP17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 ADAMTS5Q9UNA0 930 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
HERPUD1-219ENST00000570273 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms