RNA–Protein interactions for RNA: ENST00000570199.1

EPB42-209, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-209ENST00000570199 ERVFRD-1P60508 538 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 RACK1P63244 317 aaKnown RBP4.5□□□□□ -1.69
EPB42-209ENST00000570199 MLECQ14165 292 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 VWA3BQ502W6 1294 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 TMC6Q7Z403 805 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 USP48Q86UV5 1035 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 SLITRK4Q8IW52 837 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 ADGRG2Q8IZP9 1017 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 NKD1Q969G9 470 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 ATG4CQ96DT6 458 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 MAP6Q96JE9 813 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 ASPNQ9BXN1 380 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 KCNH3Q9ULD8 1083 aa4.5□□□□□ -1.69
EPB42-209ENST00000570199 A0A1B0GTL3 188 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 BUB1BO60566 1050 aaPredicted RBP4.49□□□□□ -1.69
EPB42-209ENST00000570199 SLPIP03973 132 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 PNLIPP16233 465 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 VAMP1P23763 118 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 LIMS1P48059 325 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 UBXN11Q5T124 520 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 CDCP2Q5VXM1 449 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 NLRC3Q7RTR2 1065 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 REXO1Q8N1G1 1221 aaKnown RBP4.49□□□□□ -1.69
EPB42-209ENST00000570199 HHIPL1Q96JK4 782 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 MENTQ9BUN1 341 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 CNNM2Q9H8M5 875 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 METTL5Q9NRN9 209 aaKnown RBP4.49□□□□□ -1.69
EPB42-209ENST00000570199 DUSP10Q9Y6W6 482 aa4.49□□□□□ -1.69
EPB42-209ENST00000570199 TMEM82A0PJX8 343 aa4.48□□□□□ -1.69
EPB42-209ENST00000570199 IGFBP6P24592 240 aaPredicted RBP4.48□□□□□ -1.69
EPB42-209ENST00000570199 ZNF165P49910 485 aa4.48□□□□□ -1.69
EPB42-209ENST00000570199 SNW1Q13573 536 aaKnown RBP4.48□□□□□ -1.69
EPB42-209ENST00000570199 NBPF12Q5TAG4 269 aaPredicted RBP4.48□□□□□ -1.69
EPB42-209ENST00000570199 C9orf131Q5VYM1 1079 aa4.48□□□□□ -1.69
EPB42-209ENST00000570199 CEP128Q6ZU80 1094 aa4.48□□□□□ -1.69
EPB42-209ENST00000570199 TMEM192Q8IY95 271 aa4.48□□□□□ -1.69
EPB42-209ENST00000570199 RNF34Q969K3 372 aa4.48□□□□□ -1.69
EPB42-209ENST00000570199 ZNF512BQ96KM6 892 aaPredicted RBP4.48□□□□□ -1.69
EPB42-209ENST00000570199 DDX41Q9UJV9 622 aaKnown RBP4.48□□□□□ -1.69
EPB42-209ENST00000570199 FAM86C2PA6NEL3 165 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 MEIS3P2A8K0S8 358 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 NME1P15531 152 aaKnown RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 TCF3P15923 654 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 RPL10P27635 214 aaKnown RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 KIR2DL1P43626 348 aaPredicted RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 KIR2DL2P43627 348 aaPredicted RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 HMGA2P52926 109 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 HDLBPQ00341 1268 aaKnown RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 CAP1Q01518 475 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 NMIQ13287 307 aaPredicted RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 NBPF9Q3BBW0 867 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 NT5DC1Q5TFE4 455 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 ZPBP2Q6X784 338 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 WAPLQ7Z5K2 1190 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 TMC3Q7Z5M5 1100 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 METTL16Q86W50 562 aaKnown RBP4.47□□□□□ -1.69
EPB42-209ENST00000570199 Q8N1X5 172 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 USHBP1Q8N6Y0 703 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 RBM15Q96T37 977 aaKnown RBP eCLIP4.47□□□□□ -1.69
EPB42-209ENST00000570199 SPATA25Q9BR10 227 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.47□□□□□ -1.69
EPB42-209ENST00000570199 SMPD4Q9NXE4 827 aa4.47□□□□□ -1.69
EPB42-209ENST00000570199 C1QTNF3-AMACRE9PGA6 284 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 ABLIM1O14639 778 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 TNFRSF10CO14798 259 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 SCAMP3O14828 347 aaKnown RBP4.46□□□□□ -1.7
EPB42-209ENST00000570199 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
EPB42-209ENST00000570199 ITGB3P05106 788 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 ACRP10323 421 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 CHMP4BP1P59074 171 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 RNF4P78317 190 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 SLC14A2Q15849 920 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 CLEC16AQ2KHT3 1053 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 OLFML2BQ68BL8 750 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 SLC6A18Q96N87 628 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 SLC9A7Q96T83 725 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 HDAC8Q9BY41 377 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 FOXP3Q9BZS1 431 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 ZNRF3Q9ULT6 936 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 PPT2Q9UMR5 302 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 PLA2G2DQ9UNK4 145 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 MINPP1Q9UNW1 487 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 IRS2Q9Y4H2 1338 aa4.46□□□□□ -1.7
EPB42-209ENST00000570199 CLEC3AO75596 197 aa4.45□□□□□ -1.7
EPB42-209ENST00000570199 CEBPAP49715 358 aaPredicted RBP4.45□□□□□ -1.7
EPB42-209ENST00000570199 LRRFIP1Q32MZ4 808 aaKnown RBP4.45□□□□□ -1.7
EPB42-209ENST00000570199 LIPIQ6XZB0 460 aa4.45□□□□□ -1.7
EPB42-209ENST00000570199 RNF111Q6ZNA4 994 aa4.45□□□□□ -1.7
EPB42-209ENST00000570199 LSRQ86X29 649 aaPredicted RBP4.45□□□□□ -1.7
EPB42-209ENST00000570199 PRDM14Q9GZV8 571 aa4.45□□□□□ -1.7
EPB42-209ENST00000570199 USP40Q9NVE5 1235 aa4.45□□□□□ -1.7
EPB42-209ENST00000570199 ZMYM5Q9UJ78 669 aa4.45□□□□□ -1.7
EPB42-209ENST00000570199 NUDT19A8MXV4 375 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 C9IYK1 514 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 PRAMEF1O95521 474 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 MPOP05164 745 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 C6P13671 934 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 ZNF20P17024 532 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 CNR2P34972 360 aa4.44□□□□□ -1.7
EPB42-209ENST00000570199 CCNFP41002 786 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms