RNA–Protein interactions for RNA: ENST00000570199.1

EPB42-209, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-209ENST00000570199 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
EPB42-209ENST00000570199 CHIC1Q5VXU3 224 aa19.89■□□□□ 0.77
EPB42-209ENST00000570199 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
EPB42-209ENST00000570199 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
EPB42-209ENST00000570199 FOXD1Q16676 465 aa17.09■□□□□ 0.33
EPB42-209ENST00000570199 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
EPB42-209ENST00000570199 MSH5O43196 834 aa16.03■□□□□ 0.16
EPB42-209ENST00000570199 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
EPB42-209ENST00000570199 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
EPB42-209ENST00000570199 PLPPR3Q6T4P5 718 aa15.67■□□□□ 0.1
EPB42-209ENST00000570199 ADRA2BP18089 450 aa15.62■□□□□ 0.09
EPB42-209ENST00000570199 MAPK8IP2Q13387 824 aaPredicted RBP14.48□□□□□ -0.09
EPB42-209ENST00000570199 DMRT2Q9Y5R5 561 aa14.41□□□□□ -0.1
EPB42-209ENST00000570199 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
EPB42-209ENST00000570199 CACNB1Q02641 598 aaPredicted RBP13.99□□□□□ -0.17
EPB42-209ENST00000570199 DCAF8L1A6NGE4 600 aa13.79□□□□□ -0.2
EPB42-209ENST00000570199 HOXD11P31277 338 aaPredicted RBP13.73□□□□□ -0.21
EPB42-209ENST00000570199 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
EPB42-209ENST00000570199 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
EPB42-209ENST00000570199 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
EPB42-209ENST00000570199 RNF216Q9NWF9 866 aaPredicted RBP13.49□□□□□ -0.25
EPB42-209ENST00000570199 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
EPB42-209ENST00000570199 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
EPB42-209ENST00000570199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
EPB42-209ENST00000570199 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
EPB42-209ENST00000570199 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
EPB42-209ENST00000570199 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
EPB42-209ENST00000570199 POTEHQ6S545 545 aa12.74□□□□□ -0.37
EPB42-209ENST00000570199 SPINK5Q9NQ38 1064 aaPredicted RBP12.74□□□□□ -0.37
EPB42-209ENST00000570199 DSG3P32926 999 aa12.72□□□□□ -0.37
EPB42-209ENST00000570199 CAPN15O75808 1086 aa12.64□□□□□ -0.39
EPB42-209ENST00000570199 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
EPB42-209ENST00000570199 ABCB7O75027 752 aa12.38□□□□□ -0.43
EPB42-209ENST00000570199 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
EPB42-209ENST00000570199 KCNA4P22459 653 aa12.36□□□□□ -0.43
EPB42-209ENST00000570199 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
EPB42-209ENST00000570199 APLP2Q06481 763 aa12.22□□□□□ -0.45
EPB42-209ENST00000570199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
EPB42-209ENST00000570199 HNRNPUL2Q1KMD3 747 aaKnown RBP12.15□□□□□ -0.46
EPB42-209ENST00000570199 SAMD1Q6SPF0 538 aaPredicted RBP12.1□□□□□ -0.47
EPB42-209ENST00000570199 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
EPB42-209ENST00000570199 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
EPB42-209ENST00000570199 POLA2Q14181 598 aa11.96□□□□□ -0.49
EPB42-209ENST00000570199 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
EPB42-209ENST00000570199 ATF5Q9Y2D1 282 aaPredicted RBP11.77□□□□□ -0.53
EPB42-209ENST00000570199 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
EPB42-209ENST00000570199 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
EPB42-209ENST00000570199 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
EPB42-209ENST00000570199 REM2Q8IYK8 340 aaPredicted RBP11.65□□□□□ -0.54
EPB42-209ENST00000570199 OSCARQ8IYS5 282 aa11.64□□□□□ -0.55
EPB42-209ENST00000570199 ZBTB12Q9Y330 459 aaPredicted RBP11.61□□□□□ -0.55
EPB42-209ENST00000570199 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
EPB42-209ENST00000570199 PITPNM1O00562 1244 aa11.57□□□□□ -0.56
EPB42-209ENST00000570199 FXR2P51116 673 aaKnown RBP eCLIP11.52□□□□□ -0.57
EPB42-209ENST00000570199 SLC4A1APQ9BWU0 796 aaKnown RBP11.52□□□□□ -0.57
EPB42-209ENST00000570199 HAX1O00165 279 aa11.49□□□□□ -0.57
EPB42-209ENST00000570199 EVX2Q03828 476 aa11.45□□□□□ -0.58
EPB42-209ENST00000570199 ZBTB22O15209 634 aa11.42□□□□□ -0.58
EPB42-209ENST00000570199 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
EPB42-209ENST00000570199 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
EPB42-209ENST00000570199 SPDYE2Q495Y8 402 aa11.27□□□□□ -0.61
EPB42-209ENST00000570199 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
EPB42-209ENST00000570199 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
EPB42-209ENST00000570199 MKRN4PQ13434 485 aaPredicted RBP11.2□□□□□ -0.62
EPB42-209ENST00000570199 FBLN2P98095 1184 aa11.17□□□□□ -0.62
EPB42-209ENST00000570199 CLEC11AQ9Y240 323 aa11.17□□□□□ -0.62
EPB42-209ENST00000570199 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
EPB42-209ENST00000570199 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
EPB42-209ENST00000570199 SSUH2Q9Y2M2 353 aa11.13□□□□□ -0.63
EPB42-209ENST00000570199 GABBR2O75899 941 aa11.09□□□□□ -0.63
EPB42-209ENST00000570199 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
EPB42-209ENST00000570199 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
EPB42-209ENST00000570199 LHX8Q68G74 356 aa11.01□□□□□ -0.65
EPB42-209ENST00000570199 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
EPB42-209ENST00000570199 PABPN1Q86U42 306 aaKnown RBP eCLIP10.92□□□□□ -0.66
EPB42-209ENST00000570199 PRR29P0C7W0 189 aa10.9□□□□□ -0.66
EPB42-209ENST00000570199 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
EPB42-209ENST00000570199 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
EPB42-209ENST00000570199 ZNF579Q8NAF0 562 aaKnown RBP10.67□□□□□ -0.7
EPB42-209ENST00000570199 CLCN6P51797 869 aa10.65□□□□□ -0.7
EPB42-209ENST00000570199 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
EPB42-209ENST00000570199 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
EPB42-209ENST00000570199 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
EPB42-209ENST00000570199 GALR2O43603 387 aaPredicted RBP10.61□□□□□ -0.71
EPB42-209ENST00000570199 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
EPB42-209ENST00000570199 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
EPB42-209ENST00000570199 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
EPB42-209ENST00000570199 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
EPB42-209ENST00000570199 PHF12Q96QT6 1004 aa10.49□□□□□ -0.73
EPB42-209ENST00000570199 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
EPB42-209ENST00000570199 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.73
EPB42-209ENST00000570199 MNX1P50219 401 aaPredicted RBP10.44□□□□□ -0.74
EPB42-209ENST00000570199 POTEMA6NI47 508 aa10.39□□□□□ -0.75
EPB42-209ENST00000570199 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
EPB42-209ENST00000570199 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
EPB42-209ENST00000570199 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
EPB42-209ENST00000570199 POTEGQ6S5H5 508 aa10.36□□□□□ -0.75
EPB42-209ENST00000570199 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
EPB42-209ENST00000570199 ASTLQ6HA08 431 aaPredicted RBP10.32□□□□□ -0.76
EPB42-209ENST00000570199 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms