RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	CCDC174	Q6PII3	467 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	ZNF365	Q70YC5	407 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	ARMCX2	Q7L311	632 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	TMEM199	Q8N511	208 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	STRBP	Q96SI9	672 aa	Known RBP	13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	UPF3A	Q9H1J1	476 aa	Known RBP	13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	ABHD16B	Q9H3Z7	469 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	ZBTB40	Q9NUA8	1239 aa		13.17	□□□□□ -0.3
CMC2-223	ENST00000570195	GREB1L	Q9C091	1923 aa	Predicted RBP	13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	GSG1L2	A8MUP6	293 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	ATP2A1	O14983	1001 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	TLR3	O15455	904 aa	Known RBP	13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	SMARCA5	O60264	1052 aa	Predicted RBP	13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	PRDM1	O75626	825 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	CYP2C18	P33260	490 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	BEX3	Q00994	111 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	SBK1	Q52WX2	424 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	RASIP1	Q5U651	963 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	FAM126B	Q8IXS8	530 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	LRRC47	Q8N1G4	583 aa	Known RBP	13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	SLC38A10	Q9HBR0	1119 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	HOMER2	Q9NSB8	354 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	DDX19B	Q9UMR2	479 aa		13.16	□□□□□ -0.3
CMC2-223	ENST00000570195	MUC3A	Q02505	3323 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	IGKV6D-41	A0A0C4DH26	115 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	CTAGE5	O15320	804 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	MS4A1	P11836	297 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	CNTN2	Q02246	1040 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	ADGRE1	Q14246	886 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	CCDC85B	Q15834	202 aa	Predicted RBP	13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	NOL8	Q76FK4	1167 aa	Known RBP	13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	CCDC144CP	Q8IYA2	1237 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	KATNBL1	Q9H079	304 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	FBXO40	Q9UH90	709 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	FEM1B	Q9UK73	627 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	ISY1	Q9ULR0	285 aa	Known RBP	13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	MYO9B	Q13459	2157 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	MYH7	P12883	1935 aa		13.15	□□□□□ -0.3
CMC2-223	ENST00000570195	MCM3AP	O60318	1980 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	COL9A1	P20849	921 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	IGFBP4	P22692	258 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	PTGS1	P23219	599 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	CXCL17	Q6UXB2	119 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	CHST13	Q8NET6	341 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	OSBP2	Q969R2	916 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	CHMP4C	Q96CF2	233 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	CEP95	Q96GE4	821 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	LRRCC1	Q9C099	1032 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	NKX2-4	Q9H2Z4	354 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	IL23A	Q9NPF7	189 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	THEG	Q9P2T0	379 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	MSRA	Q9UJ68	235 aa		13.14	□□□□□ -0.31
CMC2-223	ENST00000570195	ASTN1	O14525	1302 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	UMODL1	Q5DID0	1318 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	CD4	P01730	458 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	TDO2	P48775	406 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	TNFAIP2	Q03169	654 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	RAB30	Q15771	203 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	AKNAD1	Q5T1N1	836 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	SLFN13	Q68D06	897 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	GIMAP6	Q6P9H5	292 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	HERVK_113	Q902F9	699 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	MTMR4	Q9NYA4	1195 aa		13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	DDX49	Q9Y6V7	483 aa	Known RBP	13.13	□□□□□ -0.31
CMC2-223	ENST00000570195	SOWAHB	A6NEL2	793 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	TMEM232	C9JQI7	657 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	GPAA1	O43292	621 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	TTLL1	O95922	423 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	FGB	P02675	491 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	APP	P05067	770 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	BMP3	P12645	472 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	OAZ1	P54368	228 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	CCL23	P55773	120 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	OTOP2	Q7RTS6	562 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	FAM133A	Q8N9E0	248 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	KBTBD3	Q8NAB2	608 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	APPBP2	Q92624	585 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	MKL1	Q969V6	931 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	AGBL1	Q96MI9	1066 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	ASB2	Q96Q27	587 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	HIPK3	Q9H422	1215 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	ACAD9	Q9H845	621 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	A1CF	Q9NQ94	594 aa	Known RBP	13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	ECHDC1	Q9NTX5	307 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	RNF146	Q9NTX7	359 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	RAPGEFL1	Q9UHV5	662 aa		13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	YBX2	Q9Y2T7	364 aa	Known RBP	13.12	□□□□□ -0.31
CMC2-223	ENST00000570195	MYH4	Q9Y623	1939 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195		M0R2C6	588 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	RNF113A	O15541	343 aa	Known RBP	13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	NKX3-2	P78367	333 aa		13.11	□□□□□ -0.31
CMC2-223	ENST00000570195	IK	Q13123	557 aa	Predicted RBP	13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms