RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ANKLE1Q8NAG6 615 aa15.31■□□□□ 0.04
CNOT1-220ENST00000569916 CHST13Q8NET6 341 aa15.31■□□□□ 0.04
CNOT1-220ENST00000569916 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
CNOT1-220ENST00000569916 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
CNOT1-220ENST00000569916 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
CNOT1-220ENST00000569916 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
CNOT1-220ENST00000569916 GPCPD1Q9NPB8 672 aa15.31■□□□□ 0.04
CNOT1-220ENST00000569916 FBXO40Q9UH90 709 aa15.31■□□□□ 0.04
CNOT1-220ENST00000569916 DIS3Q9Y2L1 958 aaKnown RBP15.31■□□□□ 0.04
CNOT1-220ENST00000569916 NEFLP07196 543 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 MYH6P13533 1939 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 SYDE2Q5VT97 1194 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 CCDC174Q6PII3 467 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 CYB5R4Q7L1T6 521 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 PNMA1Q8ND90 353 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
CNOT1-220ENST00000569916 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 HOMER2Q9NSB8 354 aa15.3■□□□□ 0.04
CNOT1-220ENST00000569916 RBM8AQ9Y5S9 174 aaKnown RBP15.3■□□□□ 0.04
CNOT1-220ENST00000569916 E7EWF7 191 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 SEC23AQ15436 765 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 TKFCQ3LXA3 575 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 PAWRQ96IZ0 340 aaKnown RBP15.29■□□□□ 0.04
CNOT1-220ENST00000569916 FGD4Q96M96 766 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 TINF2Q9BSI4 451 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 UBAC1Q9BSL1 405 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 ACAD9Q9H845 621 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
CNOT1-220ENST00000569916 DDX20Q9UHI6 824 aaKnown RBP15.29■□□□□ 0.04
CNOT1-220ENST00000569916 MSCO60682 206 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 ICAM1P05362 532 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 GOLGA8HP0CJ92 632 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 ALAS1P13196 640 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 TAL1P17542 331 aaPredicted RBP15.28■□□□□ 0.04
CNOT1-220ENST00000569916 CNGA1P29973 690 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 TRDNQ13061 729 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 PRAMEF19Q5SWL8 479 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 GPATCH4Q5T3I0 446 aaKnown RBP15.28■□□□□ 0.04
CNOT1-220ENST00000569916 ANKRD35Q8N283 1001 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 HTATIP2Q9BUP3 242 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
CNOT1-220ENST00000569916 SEPT4O43236 478 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 MUM1L1Q5H9M0 696 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 IFIT1BQ5T764 474 aaKnown RBP15.27■□□□□ 0.04
CNOT1-220ENST00000569916 KIAA1211Q6ZU35 1233 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 NECAB2Q7Z6G3 386 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 RALYLQ86SE5 291 aaKnown RBP15.27■□□□□ 0.04
CNOT1-220ENST00000569916 NCOA7Q8NI08 942 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 TRERF1Q96PN7 1200 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 A1CFQ9NQ94 594 aaKnown RBP15.27■□□□□ 0.04
CNOT1-220ENST00000569916 NRBP1Q9UHY1 535 aa15.27■□□□□ 0.04
CNOT1-220ENST00000569916 SYNGAP1Q96PV0 1343 aa15.26■□□□□ 0.03
CNOT1-220ENST00000569916 ASPRV1Q53RT3 343 aa15.26■□□□□ 0.03
CNOT1-220ENST00000569916 MAMDC4Q6UXC1 1216 aa15.26■□□□□ 0.03
CNOT1-220ENST00000569916 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-220ENST00000569916 MB21D2Q8IYB1 491 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-220ENST00000569916 MSL3Q8N5Y2 521 aaKnown RBP15.26■□□□□ 0.03
CNOT1-220ENST00000569916 CPVLQ9H3G5 476 aa15.26■□□□□ 0.03
CNOT1-220ENST00000569916 ANO2Q9NQ90 1003 aa15.26■□□□□ 0.03
CNOT1-220ENST00000569916 PFASO15067 1338 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 WDR19Q8NEZ3 1342 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 CDC45O75419 566 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 SNAI1O95863 264 aaPredicted RBP15.25■□□□□ 0.03
CNOT1-220ENST00000569916 ZNF865P0CJ78 1059 aaPredicted RBP15.25■□□□□ 0.03
CNOT1-220ENST00000569916 COL6A1P12109 1028 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 ANTXR2P58335 489 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 CNTN2Q02246 1040 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 ANO1Q5XXA6 986 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 FAM133AQ8N9E0 248 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 UBA5Q9GZZ9 404 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 C11orf49Q9H6J7 331 aa15.25■□□□□ 0.03
CNOT1-220ENST00000569916 POTEB2H3BUK9 544 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 SLC27A2O14975 620 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 PARP1P09874 1014 aaKnown RBP15.24■□□□□ 0.03
CNOT1-220ENST00000569916 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 CHST3Q7LGC8 479 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 DPF3Q92784 378 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 SENP2Q9HC62 589 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 CYP39A1Q9NYL5 469 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 CNPY2Q9Y2B0 182 aa15.24■□□□□ 0.03
CNOT1-220ENST00000569916 ASTN1O14525 1302 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 SOWAHBA6NEL2 793 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 NFIBO00712 420 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 IFIT3O14879 490 aaKnown RBP15.23■□□□□ 0.03
CNOT1-220ENST00000569916 COL9A3Q14050 684 aaPredicted RBP15.23■□□□□ 0.03
CNOT1-220ENST00000569916 CREB3L3Q68CJ9 461 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 CASC1Q6TDU7 716 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 NSMFQ6X4W1 530 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 ARMCX2Q7L311 632 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 ADGRF4Q8IZF3 695 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
CNOT1-220ENST00000569916 PNMA2Q9UL42 364 aa15.23■□□□□ 0.03
CNOT1-220ENST00000569916 ERICH2A1L162 156 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 H0YGN5 161 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 DNM1LO00429 736 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
CNOT1-220ENST00000569916 AKR1A1P14550 325 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 WTAPQ15007 396 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms