RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 TMEM47Q9BQJ4 181 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 KAT14Q9H8E8 782 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.64□□□□□ -0.55
GDE1-205ENST00000569899 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 HERC5Q9UII4 1024 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 SSC5DA1L4H1 1573 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 NOVP48745 357 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 JAG1P78504 1218 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 NR6A1Q15406 480 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 NTRK3Q16288 839 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 FOXD4L5Q5VV16 416 aaPredicted RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 MIGA2Q7L4E1 593 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 APOBEC3FQ8IUX4 373 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 LRRC47Q8N1G4 583 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 FOXD4L4Q8WXT5 416 aaPredicted RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 CCDC17Q96LX7 622 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 ADARB2Q9NS39 739 aaKnown RBP11.64□□□□□ -0.55
GDE1-205ENST00000569899 MTMR4Q9NYA4 1195 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 ZDHHC9Q9Y397 364 aa11.64□□□□□ -0.55
GDE1-205ENST00000569899 PLEKHA8P1O95397 391 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 FDPSP14324 419 aaKnown RBP11.63□□□□□ -0.55
GDE1-205ENST00000569899 SYT1P21579 422 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 CTHP32929 405 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 NUCB2P80303 420 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 HMGN5P82970 282 aaKnown RBP11.63□□□□□ -0.55
GDE1-205ENST00000569899 CMTR1Q8N1G2 835 aaKnown RBP11.63□□□□□ -0.55
GDE1-205ENST00000569899 FANCBQ8NB91 859 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 PHKBQ93100 1093 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 CHMP4CQ96CF2 233 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 DEFB129Q9H1M3 183 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 MTMR7Q9Y216 660 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 PHIPQ8WWQ0 1821 aa11.63□□□□□ -0.55
GDE1-205ENST00000569899 VPS37CA5D8V6 355 aaPredicted RBP11.62□□□□□ -0.55
GDE1-205ENST00000569899 GLTPD2A6NH11 291 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 STX6O43752 255 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 BRD1O95696 1058 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 GH2P01242 217 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 CALM1P0DP23 149 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 CALM2P0DP24 149 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 CALM3P0DP25 149 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 TOP1P11387 765 aaKnown RBP11.62□□□□□ -0.55
GDE1-205ENST00000569899 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 SEPT2Q15019 361 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 ABCB5Q2M3G0 1257 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 FAM184AQ8NB25 1140 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 TNPO1Q92973 898 aaKnown RBP11.62□□□□□ -0.55
GDE1-205ENST00000569899 ORC3Q9UBD5 711 aaPredicted RBP11.62□□□□□ -0.55
GDE1-205ENST00000569899 CNTNAP5Q8WYK1 1306 aa11.62□□□□□ -0.55
GDE1-205ENST00000569899 UBE2Q2LH0YL09 131 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 CDKL5O76039 1030 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 TTLL1O95922 423 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 ATP2B2Q01814 1243 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 ICA1Q05084 483 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 GRM4Q14833 912 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 NBPF12Q5TAG4 269 aaPredicted RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 LARP1BQ659C4 914 aaKnown RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 PTCRAQ6ISU1 281 aaPredicted RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 CPLX2Q6PUV4 134 aaKnown RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 TMEM179Q6ZVK1 233 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 TMTC3Q6ZXV5 915 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 CDC37L1Q7L3B6 337 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 ANKLE1Q8NAG6 615 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 SLC26A6Q9BXS9 759 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 RBM28Q9NW13 759 aaKnown RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
GDE1-205ENST00000569899 MTMR6Q9Y217 621 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
GDE1-205ENST00000569899 CCDC196A0A1B0GTZ2 297 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 IFNAR1P17181 557 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 EPHX2P34913 555 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 PRAMEF18Q5VWM3 479 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 NBPF11Q86T75 865 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 CCDC82Q8N4S0 544 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 POM121Q96HA1 1249 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 AIFM3Q96NN9 605 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 WDR33Q9C0J8 1336 aaKnown RBP11.6□□□□□ -0.55
GDE1-205ENST00000569899 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 ZBTB21Q9ULJ3 1066 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 ADM5C9JUS6 153 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 ZSCAN22P10073 491 aaPredicted RBP11.6□□□□□ -0.55
GDE1-205ENST00000569899 EEF2P13639 858 aaKnown RBP11.6□□□□□ -0.55
GDE1-205ENST00000569899 PDCP20941 246 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 MAP3K10Q02779 954 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 PLA2G2CQ5R387 149 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 STAG2Q8N3U4 1231 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 MAD2L2Q9UI95 211 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
GDE1-205ENST00000569899 PDHBP11177 359 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 KIF5BP33176 963 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 GUCY1B3Q02153 619 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 SSRP1Q08945 709 aaKnown RBP11.59□□□□□ -0.55
GDE1-205ENST00000569899 PPP2R5BQ15173 497 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
GDE1-205ENST00000569899 CHAMP1Q96JM3 812 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 MAP3K14Q99558 947 aa11.59□□□□□ -0.55
GDE1-205ENST00000569899 KANSL2Q9H9L4 492 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms