RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 ZNF830Q96NB3 372 aaPredicted RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 CTAGE1Q96RT6 745 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 TMEM47Q9BQJ4 181 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 MRIQ9BWK5 157 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 XPO4Q9C0E2 1151 aaKnown RBP6.5□□□□□ -1.37
CDH13-213ENST00000569454 GLT8D2Q9H1C3 349 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 EHD4Q9H223 541 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 C6orf50Q9HD87 102 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 IL17RBQ9NRM6 502 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 IFNKQ9P0W0 207 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 MAD2L2Q9UI95 211 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 MAN1B1Q9UKM7 699 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 PCDHB8Q9UN66 801 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 STX8Q9UNK0 236 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 PARP3Q9Y6F1 533 aa6.5□□□□□ -1.37
CDH13-213ENST00000569454 COL6A3P12111 3177 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 COL2A1P02458 1487 aaPredicted RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 BRWD3Q6RI45 1802 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 KLRF2D3W0D1 207 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 G3V3G9 751 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 UBE2Q2LH0YL09 131 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 GTPBP6O43824 516 aaPredicted RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 TRIM37O94972 964 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 LMOD1P29536 600 aaPredicted RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 FXR1P51114 621 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDH13-213ENST00000569454 NAPAP54920 295 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 UBASH3AP57075 661 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 GABPAQ06546 454 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 PTGDRQ13258 359 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 SYCP1Q15431 976 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 DOK7Q18PE1 504 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 CCDC144BQ3MJ40 725 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 CFAP100Q494V2 611 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 GPATCH4Q5T3I0 446 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 DCAF8Q5TAQ9 597 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 CC2D2BQ6DHV5 1058 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 STYK1Q6J9G0 422 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 DPP8Q6V1X1 898 aaPredicted RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 PIK3AP1Q6ZUJ8 805 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 ANKRD20A12PQ8NF67 263 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 CACTINQ8WUQ7 758 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 SYMPKQ92797 1274 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 TEKT1Q969V4 418 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 CCDC47Q96A33 483 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 NAP1L4Q99733 375 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 ZMYND12Q9H0C1 365 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 DHX36Q9H2U1 1008 aaKnown RBP6.49□□□□□ -1.37
CDH13-213ENST00000569454 POLLQ9UGP5 575 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 SERTAD1Q9UHV2 236 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 DAGLAQ9Y4D2 1042 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 ANKRD31Q8N7Z5 1873 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 CDK5RAP2Q96SN8 1893 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 SYNRGQ9UMZ2 1314 aa6.49□□□□□ -1.37
CDH13-213ENST00000569454 VWA3AA6NCI4 1184 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 USP17L3A6NCW0 530 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 USP17L4A6NCW7 530 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 SMIM22K7EJ46 135 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 M0R2N6 131 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 STXBP3O00186 592 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 FOXN1O15353 648 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 SLC26A4O43511 780 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 NMT2O60551 498 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 TTLL1O95922 423 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 SNHG28P0DPA3 235 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 PYGBP11216 843 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 ZNF18P17022 549 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 ATP2B1P20020 1258 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 GTF2IP78347 998 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 CCZ1BP86790 482 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 CCZ1P86791 482 aaPredicted RBP6.48□□□□□ -1.37
CDH13-213ENST00000569454 DPYDQ12882 1025 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 STIM1Q13586 685 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 NONOQ15233 471 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDH13-213ENST00000569454 PTPN14Q15678 1187 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 E2F4Q16254 413 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 TPD52L1Q16890 204 aaPredicted RBP6.48□□□□□ -1.37
CDH13-213ENST00000569454 FILIP1LQ4L180 1135 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 SPATA1Q5VX52 437 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 WWC2Q6AWC2 1192 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 DTHD1Q6ZMT9 781 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 USP17L1Q7RTZ2 530 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 TMC6Q7Z403 805 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 HEATR3Q7Z4Q2 680 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 ZNF467Q7Z7K2 595 aaPredicted RBP6.48□□□□□ -1.37
CDH13-213ENST00000569454 VSTM4Q8IW00 320 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 REXO1Q8N1G1 1221 aaKnown RBP6.48□□□□□ -1.37
CDH13-213ENST00000569454 SUPT20HQ8NEM7 779 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 SPOCK2Q92563 424 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 ERCC4Q92889 916 aaPredicted RBP6.48□□□□□ -1.37
CDH13-213ENST00000569454 DHX58Q96C10 678 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 SHISA4Q96DD7 197 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 FAM122AQ96E09 287 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 DYNLL2Q96FJ2 89 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 RAB34Q9BZG1 259 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 CCSER1Q9C0I3 900 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 PRDM6Q9NQX0 595 aa6.48□□□□□ -1.37
CDH13-213ENST00000569454 NRBP1Q9UHY1 535 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms