RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 RAD9AQ99638 391 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 FEZ1Q99689 392 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 SIL1Q9H173 461 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 TRPV6Q9H1D0 765 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 RPAP3Q9H6T3 665 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 CLDND1Q9NY35 253 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 MTUS1Q9ULD2 1270 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 MYH1P12882 1939 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 HELZ2Q9BYK8 2649 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 GRIN2DO15399 1336 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 SCN10AQ9Y5Y9 1956 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 LINC01553A4QN01 128 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 LOC730098B7Z3J9 87 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 GRM8O00222 908 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 SNAI1O95863 264 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 FLIIQ13045 1269 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 KIAA2013Q8IYS2 634 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 TSPYL6Q8N831 410 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 MMP19Q99542 508 aa8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 SH2B1Q9NRF2 756 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 GNL3LQ9NVN8 582 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-217ENST00000569429 CEP295Q9C0D2 2601 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 ADCY6O43306 1168 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 GJB5O95377 273 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 SLC25A27O95847 323 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 PGK2P07205 417 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 KCNJ6P48051 423 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 FKBP5Q13451 457 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 BEND3Q5T5X7 828 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 CXCL17Q6UXB2 119 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 MAMDC4Q6UXC1 1216 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 RPAINQ86UA6 219 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 FBXO22Q8NEZ5 403 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 KAZALD1Q96I82 304 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 ZBED2Q9BTP6 218 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 SEMA4AQ9H3S1 761 aa8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 NSUN3Q9H649 340 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-217ENST00000569429 CACNA1IQ9P0X4 2223 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 SPEGQ15772 3267 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 FRYQ5TBA9 3013 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 PDGFBP01127 241 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 GH2P01242 217 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 SUPT20HL2P0C7V6 817 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 WDR5P61964 334 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 DLX2Q07687 328 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 PLS1Q14651 629 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 KIAA0319Q5VV43 1072 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 SPTY2D1Q68D10 685 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 TMEM105Q8N8V8 129 aa8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 ZHX1Q9UKY1 873 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-217ENST00000569429 PITPNM1O00562 1244 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 EYA4O95677 639 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 LMNAP02545 664 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 IQCF3P0C7M6 154 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 ICAM3P32942 547 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 MECOMQ03112 1051 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 ACVR2BQ13705 512 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 CCDC144BQ3MJ40 725 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 RABL6Q3YEC7 729 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 CCDC146Q8IYE0 955 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 CRACR2BQ8N4Y2 399 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 ACER1Q8TDN7 264 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 ZNF384Q8TF68 577 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 RUNDC1Q96C34 613 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 CHAMP1Q96JM3 812 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 SAMD11Q96NU1 681 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 C17orf80Q9BSJ5 609 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 FTOQ9C0B1 505 aaKnown RBP eCLIP8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 ALDH8A1Q9H2A2 487 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 ABCF2Q9UG63 623 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 CD207Q9UJ71 328 aa8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 PDS5AQ29RF7 1337 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-217ENST00000569429 BPTFQ12830 3046 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 H3BNC9 293 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 LDHCP07864 332 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 CYP2C9P11712 490 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 DEFB103AP81534 67 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 BEX3Q00994 111 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 CLUL1Q15846 466 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 RSPO4Q2I0M5 234 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 TATDN1Q6P1N9 297 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 ERICH6Q7L0X2 663 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 TMCO2Q7Z6W1 182 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 TEX11Q8IYF3 940 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 SUCLG2Q96I99 432 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 TRIM34Q9BYJ4 488 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 C9orf78Q9NZ63 289 aaPredicted RBP8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 PCDHGC5Q9Y5F6 944 aa8.21□□□□□ -1.1
HERPUD1-217ENST00000569429 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 TBX10O75333 385 aa8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 ADRB1P08588 477 aa8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 SDHBP21912 280 aa8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 PHKA1P46020 1223 aa8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 MKRN4PQ13434 485 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 TMEM132BQ14DG7 1078 aa8.2□□□□□ -1.1
HERPUD1-217ENST00000569429 PTPN21Q16825 1174 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms