RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SNX1Q13596 522 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 LAMB3Q13751 1172 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 PDXDC1Q6P996 788 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 SAMM50Q9Y512 469 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 HMGXB3Q12766 1538 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 UGGT2Q9NYU1 1516 aa7.77□□□□□ -1.17
CNOT1-216ENST00000569240 MIF4GDA9UHW6 222 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 ZRANB2O95218 330 aaKnown RBP eCLIP7.76□□□□□ -1.171e-6■■■□□ 17.1
CNOT1-216ENST00000569240 ESRRAP11474 423 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 PCP11498 1178 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 IFIT1BQ5T764 474 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 ANKLE2Q86XL3 938 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 PAWRQ96IZ0 340 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 ALDH8A1Q9H2A2 487 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 PAG1Q9NWQ8 432 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 TRAF5O00463 557 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 SERPINB6P35237 376 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 MORC3Q14149 939 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 SPARCL1Q14515 664 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 CDC37L1Q7L3B6 337 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 LRGUKQ96M69 825 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 MAK16Q9BXY0 300 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 C14orf93Q9H972 538 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 HACD3Q9P035 362 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 EXOC7Q9UPT5 735 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 ARL2BPQ9Y2Y0 163 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 FAM133BQ5BKY9 247 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 C16orf87Q6PH81 154 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 UPF3AQ9H1J1 476 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 THAP9Q9H5L6 903 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 RPL26L1Q9UNX3 145 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 STAT1P42224 750 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 CROCCP3Q8IVE0 287 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 PRPF38AQ8NAV1 312 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 CCT6BQ92526 530 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 EPSTI1Q96J88 318 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 MTRQ99707 1265 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 KDM3AQ9Y4C1 1321 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 GRM8O00222 908 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 RANBP6O60518 1105 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 NR1I2O75469 434 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 APOEP02649 317 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 MCF2P10911 925 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 PAPOLAP51003 745 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 MDM2Q00987 491 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 DNAL1Q4LDG9 190 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 TBC1D1Q86TI0 1168 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 KIAA0586Q9BVV6 1533 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 KRT75O95678 551 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 GARSP41250 739 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 WDR93Q6P2C0 686 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 ZC3H18Q86VM9 953 aaKnown RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 SYT2Q8N9I0 419 aaPredicted RBP7.76□□□□□ -1.17
CNOT1-216ENST00000569240 SNX29Q8TEQ0 813 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 FMO2Q99518 471 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 HAUS2Q9NVX0 235 aa7.76□□□□□ -1.17
CNOT1-216ENST00000569240 MDH1P40925 334 aaKnown RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 PDE1BQ01064 536 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 CRELD2Q6UXH1 353 aaPredicted RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ARHGAP22Q7Z5H3 698 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 FRMD3A2A2Y4 597 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 POLR2DO15514 142 aaKnown RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 GGPS1O95749 300 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 STARD3NLO95772 234 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 AGTP01019 485 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ATF2P15336 505 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 LONP1P36776 959 aaKnown RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 GUCY2FP51841 1108 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 TBCCQ15814 346 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 FSCBQ5H9T9 825 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 TAB2Q9NYJ8 693 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 CCDC22O60826 627 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 FAM13AO94988 1023 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 EEF2P13639 858 aaKnown RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ADKP55263 362 aaKnown RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 CABP4P57796 275 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ITIH4Q14624 930 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 TTC38Q5R3I4 469 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ZFATQ9P243 1243 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 RWDD2AQ9UIY3 292 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ABCA10Q8WWZ4 1543 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 SPATA31E1Q6ZUB1 1445 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 KCNK3O14649 394 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 NDUFA10O95299 355 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 CCDC82Q8N4S0 544 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 CTNNAL1Q9UBT7 734 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 STK17AQ9UEE5 414 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ORC6Q9Y5N6 252 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 GIPC1O14908 333 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 AREL1O15033 823 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 DKC1O60832 514 aaKnown RBP eCLIP7.75□□□□□ -1.171e-323■■■■■ 27.4
CNOT1-216ENST00000569240 DIS3L2Q8IYB7 885 aaKnown RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 ELOA2Q8IYF1 753 aaPredicted RBP7.75□□□□□ -1.17
CNOT1-216ENST00000569240 TESK2Q96S53 571 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 EPB41L5Q9HCM4 733 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 DYTNA2CJ06 578 aa7.75□□□□□ -1.17
CNOT1-216ENST00000569240 KRT40Q6A162 431 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms