RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 ZNF467Q7Z7K2 595 aaPredicted RBP23.86■■□□□ 1.41
CLK3-225ENST00000569063 ANKRD35Q8N283 1001 aa23.86■■□□□ 1.41
CLK3-225ENST00000569063 ACAD9Q9H845 621 aa23.86■■□□□ 1.41
CLK3-225ENST00000569063 PFASO15067 1338 aa23.85■■□□□ 1.41
CLK3-225ENST00000569063 FRMPD3Q5JV73 1810 aa23.85■■□□□ 1.41
CLK3-225ENST00000569063 SGSM2O43147 1006 aa23.85■■□□□ 1.41
CLK3-225ENST00000569063 PTH1RQ03431 593 aa23.85■■□□□ 1.41
CLK3-225ENST00000569063 MAMDC4Q6UXC1 1216 aa23.85■■□□□ 1.41
CLK3-225ENST00000569063 ZSCAN10Q96SZ4 725 aaPredicted RBP23.85■■□□□ 1.41
CLK3-225ENST00000569063 RANBP17Q9H2T7 1088 aaKnown RBP23.85■■□□□ 1.41
CLK3-225ENST00000569063 HOMER2Q9NSB8 354 aa23.85■■□□□ 1.41
CLK3-225ENST00000569063 FRMPD2Q68DX3 1309 aaPredicted RBP23.84■■□□□ 1.41
CLK3-225ENST00000569063 SYNGAP1Q96PV0 1343 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 SLC16A2P36021 539 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 SNAP25P60880 206 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 ZNF543Q08ER8 600 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 SYDE2Q5VT97 1194 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 CCDC174Q6PII3 467 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 GPCPD1Q9NPB8 672 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 RNF146Q9NTX7 359 aa23.84■■□□□ 1.41
CLK3-225ENST00000569063 DNM1LO00429 736 aa23.83■■□□□ 1.41
CLK3-225ENST00000569063 ICAM1P05362 532 aa23.83■■□□□ 1.41
CLK3-225ENST00000569063 TRERF1Q96PN7 1200 aa23.83■■□□□ 1.41
CLK3-225ENST00000569063 ZNF865P0CJ78 1059 aaPredicted RBP23.82■■□□□ 1.4
CLK3-225ENST00000569063 ALAS1P13196 640 aa23.82■■□□□ 1.4
CLK3-225ENST00000569063 GPATCH4Q5T3I0 446 aaKnown RBP23.82■■□□□ 1.4
CLK3-225ENST00000569063 ENAHQ8N8S7 591 aaPredicted RBP23.82■■□□□ 1.4
CLK3-225ENST00000569063 ARRDC4Q8NCT1 418 aa23.82■■□□□ 1.4
CLK3-225ENST00000569063 PNMA1Q8ND90 353 aa23.82■■□□□ 1.4
CLK3-225ENST00000569063 FGD4Q96M96 766 aa23.82■■□□□ 1.4
CLK3-225ENST00000569063 CNPY2Q9Y2B0 182 aa23.82■■□□□ 1.4
CLK3-225ENST00000569063 U3KPZ7 1027 aaPredicted RBP23.82■■□□□ 1.4
CLK3-225ENST00000569063 SNAI1O95863 264 aaPredicted RBP23.81■■□□□ 1.4
CLK3-225ENST00000569063 CYP21A2P08686 494 aa23.81■■□□□ 1.4
CLK3-225ENST00000569063 TAL1P17542 331 aaPredicted RBP23.81■■□□□ 1.4
CLK3-225ENST00000569063 KAT14Q9H8E8 782 aa23.81■■□□□ 1.4
CLK3-225ENST00000569063 A1CFQ9NQ94 594 aaKnown RBP23.81■■□□□ 1.4
CLK3-225ENST00000569063 CCPG1Q9ULG6 757 aa23.81■■□□□ 1.4
CLK3-225ENST00000569063 TNKSO95271 1327 aa23.81■■□□□ 1.4
CLK3-225ENST00000569063 MUM1L1Q5H9M0 696 aa23.8■■□□□ 1.4
CLK3-225ENST00000569063 ANO1Q5XXA6 986 aa23.8■■□□□ 1.4
CLK3-225ENST00000569063 FAM133AQ8N9E0 248 aa23.8■■□□□ 1.4
CLK3-225ENST00000569063 MAP4K1Q92918 833 aa23.8■■□□□ 1.4
CLK3-225ENST00000569063 UBAC1Q9BSL1 405 aa23.8■■□□□ 1.4
CLK3-225ENST00000569063 COLQQ9Y215 455 aaPredicted RBP23.8■■□□□ 1.4
CLK3-225ENST00000569063 ALPK3Q96L96 1907 aa23.8■■□□□ 1.4
CLK3-225ENST00000569063 PNMA2Q9UL42 364 aa23.79■■□□□ 1.4
CLK3-225ENST00000569063 POTEB2H3BUK9 544 aa23.78■■□□□ 1.4
CLK3-225ENST00000569063 RARBP10826 455 aa23.78■■□□□ 1.4
CLK3-225ENST00000569063 AKR1A1P14550 325 aa23.78■■□□□ 1.4
CLK3-225ENST00000569063 CNTN2Q02246 1040 aa23.78■■□□□ 1.4
CLK3-225ENST00000569063 TRDNQ13061 729 aa23.78■■□□□ 1.4
CLK3-225ENST00000569063 HABP4Q5JVS0 413 aaKnown RBP23.78■■□□□ 1.4
CLK3-225ENST00000569063 GJC2Q5T442 439 aaPredicted RBP23.78■■□□□ 1.4
CLK3-225ENST00000569063 SENP6Q9GZR1 1112 aaPredicted RBP23.78■■□□□ 1.4
CLK3-225ENST00000569063 CYP39A1Q9NYL5 469 aa23.78■■□□□ 1.4
CLK3-225ENST00000569063 GOLGA8HP0CJ92 632 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 LRRC41Q15345 812 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 SEC23AQ15436 765 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 LRRC26Q2I0M4 334 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 BMP2KLQ5H9B9 411 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 CYB5R4Q7L1T6 521 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 C7orf61Q8IZ16 206 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 ABHD16BQ9H3Z7 469 aa23.77■■□□□ 1.4
CLK3-225ENST00000569063 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.77■■□□□ 1.4
CLK3-225ENST00000569063 SOWAHBA6NEL2 793 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 KBTBD13C9JR72 458 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 ACVR2BQ13705 512 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 ASPRV1Q53RT3 343 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 IFIT1BQ5T764 474 aaKnown RBP23.76■■□□□ 1.39
CLK3-225ENST00000569063 ARMCX2Q7L311 632 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 XPNPEP3Q9NQH7 507 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 FAM184BQ9ULE4 1060 aa23.76■■□□□ 1.39
CLK3-225ENST00000569063 E7EWF7 191 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 CHRDL2Q6WN34 429 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 KIAA1211Q6ZU35 1233 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 SKAP1Q86WV1 359 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 CCDC144CPQ8IYA2 1237 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 UBA5Q9GZZ9 404 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 ZHX1Q9UKY1 873 aaPredicted RBP23.75■■□□□ 1.39
CLK3-225ENST00000569063 TAF6LQ9Y6J9 622 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 WDR19Q8NEZ3 1342 aa23.75■■□□□ 1.39
CLK3-225ENST00000569063 ASB14A6NK59 587 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 NSMFQ6X4W1 530 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 NCOA7Q8NI08 942 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 ESYT1Q9BSJ8 1104 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 KATNBL1Q9H079 304 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 PRO3102Q9H379 93 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 RBM8AQ9Y5S9 174 aaKnown RBP23.74■■□□□ 1.39
CLK3-225ENST00000569063 SMCHD1A6NHR9 2005 aa23.74■■□□□ 1.39
CLK3-225ENST00000569063 NFIBO00712 420 aa23.73■■□□□ 1.39
CLK3-225ENST00000569063 PARP1P09874 1014 aaKnown RBP23.73■■□□□ 1.39
CLK3-225ENST00000569063 RALYLQ86SE5 291 aaKnown RBP23.73■■□□□ 1.39
CLK3-225ENST00000569063 RNF180Q86T96 592 aa23.73■■□□□ 1.39
CLK3-225ENST00000569063 CLEC4DQ8WXI8 215 aa23.73■■□□□ 1.39
CLK3-225ENST00000569063 LSG1Q9H089 658 aaKnown RBP23.73■■□□□ 1.39
CLK3-225ENST00000569063 CPVLQ9H3G5 476 aa23.73■■□□□ 1.39
CLK3-225ENST00000569063 ASTN1O14525 1302 aa23.73■■□□□ 1.39
CLK3-225ENST00000569063 DUSP11O75319 330 aaKnown RBP23.72■■□□□ 1.39
CLK3-225ENST00000569063 PGK1P00558 417 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms