RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 MCM3APO60318 1980 aa23.69■■□□□ 1.38
ABCA3-206ENST00000569062 TAL1P17542 331 aaPredicted RBP23.69■■□□□ 1.38
ABCA3-206ENST00000569062 BTNL9Q6UXG8 535 aa23.69■■□□□ 1.38
ABCA3-206ENST00000569062 SKAP1Q86WV1 359 aa23.69■■□□□ 1.38
ABCA3-206ENST00000569062 ZSWIM5Q9P217 1185 aa23.69■■□□□ 1.38
ABCA3-206ENST00000569062 ALAS1P13196 640 aa23.68■■□□□ 1.38
ABCA3-206ENST00000569062 IQCA1Q86XH1 822 aa23.68■■□□□ 1.38
ABCA3-206ENST00000569062 DGKHQ86XP1 1220 aa23.68■■□□□ 1.38
ABCA3-206ENST00000569062 ACAD9Q9H845 621 aa23.68■■□□□ 1.38
ABCA3-206ENST00000569062 RNF146Q9NTX7 359 aa23.68■■□□□ 1.38
ABCA3-206ENST00000569062 COLQQ9Y215 455 aaPredicted RBP23.68■■□□□ 1.38
ABCA3-206ENST00000569062 DNAH12Q6ZR08 3092 aa23.68■■□□□ 1.38
ABCA3-206ENST00000569062 SGSM2O43147 1006 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 SNHG28P0DPA3 235 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 NT5C2P49902 561 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 SYDE2Q5VT97 1194 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 FGD4Q96M96 766 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 TRERF1Q96PN7 1200 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 ZSCAN10Q96SZ4 725 aaPredicted RBP23.67■■□□□ 1.38
ABCA3-206ENST00000569062 KRT23Q9C075 422 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 RANBP17Q9H2T7 1088 aaKnown RBP23.67■■□□□ 1.38
ABCA3-206ENST00000569062 NRBP1Q9UHY1 535 aa23.67■■□□□ 1.38
ABCA3-206ENST00000569062 SNAI1O95863 264 aaPredicted RBP23.66■■□□□ 1.38
ABCA3-206ENST00000569062 ZNF865P0CJ78 1059 aaPredicted RBP23.66■■□□□ 1.38
ABCA3-206ENST00000569062 ZNF543Q08ER8 600 aa23.66■■□□□ 1.38
ABCA3-206ENST00000569062 MUM1L1Q5H9M0 696 aa23.66■■□□□ 1.38
ABCA3-206ENST00000569062 GJC2Q5T442 439 aaPredicted RBP23.66■■□□□ 1.38
ABCA3-206ENST00000569062 MAMDC4Q6UXC1 1216 aa23.66■■□□□ 1.38
ABCA3-206ENST00000569062 C7orf61Q8IZ16 206 aa23.66■■□□□ 1.38
ABCA3-206ENST00000569062 A1CFQ9NQ94 594 aaKnown RBP23.66■■□□□ 1.38
ABCA3-206ENST00000569062 SYNGAP1Q96PV0 1343 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 LCTP09848 1927 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 DNM1LO00429 736 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 ICAM1P05362 532 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 CNTN2Q02246 1040 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 TKFCQ3LXA3 575 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 CCDC178Q5BJE1 867 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 HABP4Q5JVS0 413 aaKnown RBP23.65■■□□□ 1.38
ABCA3-206ENST00000569062 CHRDL2Q6WN34 429 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 CENPQQ7L2Z9 268 aaPredicted RBP23.65■■□□□ 1.38
ABCA3-206ENST00000569062 MSL3Q8N5Y2 521 aaKnown RBP23.65■■□□□ 1.38
ABCA3-206ENST00000569062 ENAHQ8N8S7 591 aaPredicted RBP23.65■■□□□ 1.38
ABCA3-206ENST00000569062 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 ANKS1AQ92625 1134 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 SENP6Q9GZR1 1112 aaPredicted RBP23.65■■□□□ 1.38
ABCA3-206ENST00000569062 CNNM2Q9H8M5 875 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 CCPG1Q9ULG6 757 aa23.65■■□□□ 1.38
ABCA3-206ENST00000569062 TNKSO95271 1327 aa23.64■■□□□ 1.38
ABCA3-206ENST00000569062 CYP21A2P08686 494 aa23.64■■□□□ 1.37
ABCA3-206ENST00000569062 GOLGA8HP0CJ92 632 aa23.64■■□□□ 1.37
ABCA3-206ENST00000569062 LRRC26Q2I0M4 334 aa23.64■■□□□ 1.37
ABCA3-206ENST00000569062 ZNF467Q7Z7K2 595 aaPredicted RBP23.64■■□□□ 1.37
ABCA3-206ENST00000569062 KAT14Q9H8E8 782 aa23.64■■□□□ 1.37
ABCA3-206ENST00000569062 CNPY2Q9Y2B0 182 aa23.64■■□□□ 1.37
ABCA3-206ENST00000569062 MYCNP04198 464 aaPredicted RBP23.63■■□□□ 1.37
ABCA3-206ENST00000569062 CYB5R4Q7L1T6 521 aa23.63■■□□□ 1.37
ABCA3-206ENST00000569062 FAM133AQ8N9E0 248 aa23.63■■□□□ 1.37
ABCA3-206ENST00000569062 ARRDC4Q8NCT1 418 aa23.63■■□□□ 1.37
ABCA3-206ENST00000569062 LENG1Q96BZ8 264 aaPredicted RBP23.63■■□□□ 1.37
ABCA3-206ENST00000569062 CPVLQ9H3G5 476 aa23.63■■□□□ 1.37
ABCA3-206ENST00000569062 TAF6LQ9Y6J9 622 aa23.63■■□□□ 1.37
ABCA3-206ENST00000569062 POTEB2H3BUK9 544 aa23.62■■□□□ 1.37
ABCA3-206ENST00000569062 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.62■■□□□ 1.37
ABCA3-206ENST00000569062 ZHX1Q9UKY1 873 aaPredicted RBP23.62■■□□□ 1.37
ABCA3-206ENST00000569062 U3KPZ7 1027 aaPredicted RBP23.62■■□□□ 1.37
ABCA3-206ENST00000569062 SOWAHBA6NEL2 793 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 RARBP10826 455 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 AKR1A1P14550 325 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 LRRC41Q15345 812 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 GPATCH4Q5T3I0 446 aaKnown RBP23.61■■□□□ 1.37
ABCA3-206ENST00000569062 ARMCX2Q7L311 632 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 CCDC144CPQ8IYA2 1237 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 UBAC1Q9BSL1 405 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 UBA5Q9GZZ9 404 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 XPNPEP3Q9NQH7 507 aa23.61■■□□□ 1.37
ABCA3-206ENST00000569062 ZMYND8Q9ULU4 1186 aaPredicted RBP23.61■■□□□ 1.37
ABCA3-206ENST00000569062 KBTBD13C9JR72 458 aa23.6■■□□□ 1.37
ABCA3-206ENST00000569062 PGK1P00558 417 aa23.6■■□□□ 1.37
ABCA3-206ENST00000569062 ATN1P54259 1190 aaPredicted RBP23.6■■□□□ 1.37
ABCA3-206ENST00000569062 NSMFQ6X4W1 530 aa23.6■■□□□ 1.37
ABCA3-206ENST00000569062 MAP4K1Q92918 833 aa23.6■■□□□ 1.37
ABCA3-206ENST00000569062 CYP39A1Q9NYL5 469 aa23.6■■□□□ 1.37
ABCA3-206ENST00000569062 PCDH10Q9P2E7 1040 aa23.6■■□□□ 1.37
ABCA3-206ENST00000569062 RBM27Q9P2N5 1060 aaKnown RBP23.6■■□□□ 1.37
ABCA3-206ENST00000569062 RANBP2P49792 3224 aaKnown RBP23.6■■□□□ 1.37
ABCA3-206ENST00000569062 ASTN1O14525 1302 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 LRRC37A2A6NM11 1700 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 SYN1P17600 705 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 TRDNQ13061 729 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 ACVR2BQ13705 512 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 SEC23AQ15436 765 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 PURBQ96QR8 312 aaKnown RBP23.59■■□□□ 1.37
ABCA3-206ENST00000569062 FAM184BQ9ULE4 1060 aa23.59■■□□□ 1.37
ABCA3-206ENST00000569062 DDX49Q9Y6V7 483 aaKnown RBP23.59■■□□□ 1.37
ABCA3-206ENST00000569062 E7EWF7 191 aa23.58■■□□□ 1.37
ABCA3-206ENST00000569062 NFIBO00712 420 aa23.58■■□□□ 1.37
ABCA3-206ENST00000569062 IFIT1BQ5T764 474 aaKnown RBP23.58■■□□□ 1.37
ABCA3-206ENST00000569062 STOX1Q6ZVD7 989 aa23.58■■□□□ 1.37
ABCA3-206ENST00000569062 KATNBL1Q9H079 304 aa23.58■■□□□ 1.37
ABCA3-206ENST00000569062 PRO3102Q9H379 93 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms