RNA–Protein interactions for RNA: ENST00000568886.5

VAC14-211, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-211ENST00000568886 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
VAC14-211ENST00000568886 USP17L24Q0WX57 530 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 MKRN3Q13064 507 aaKnown RBP17.72■□□□□ 0.43
VAC14-211ENST00000568886 GRM4Q14833 912 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 GADL1Q6ZQY3 521 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 CLSTN2Q9H4D0 955 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 KLF18A0A0U1RQI7 1052 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 HTRA3P83110 453 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 ZNF543Q08ER8 600 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 RESTQ13127 1097 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 STK3Q13188 491 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 KCNF1Q9H3M0 494 aa17.72■□□□□ 0.43
VAC14-211ENST00000568886 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.43
VAC14-211ENST00000568886 CATSPERGQ6ZRH7 1159 aa17.71■□□□□ 0.43
VAC14-211ENST00000568886 RPAP3Q9H6T3 665 aaPredicted RBP17.71■□□□□ 0.43
VAC14-211ENST00000568886 FEM1BQ9UK73 627 aa17.71■□□□□ 0.43
VAC14-211ENST00000568886 BTBD19C9JJ37 291 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 ZBTB43O43298 467 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 PARP1P09874 1014 aaKnown RBP17.7■□□□□ 0.42
VAC14-211ENST00000568886 KIF5BP33176 963 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 APOBRQ0VD83 1088 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 CAMK4Q16566 473 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 TREML2Q5T2D2 321 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 BTNL9Q6UXG8 535 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 SPICE1Q8N0Z3 855 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 PTPN18Q99952 460 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 LLPHQ9BRT6 129 aaKnown RBP17.7■□□□□ 0.42
VAC14-211ENST00000568886 ZSCAN16Q9H4T2 348 aaPredicted RBP17.7■□□□□ 0.42
VAC14-211ENST00000568886 PNMA3Q9UL41 463 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 PALM3A6NDB9 673 aaPredicted RBP17.7■□□□□ 0.42
VAC14-211ENST00000568886 JAK2O60674 1132 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 ALDH1A1P00352 501 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 DGKZQ13574 1117 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 FAM83BQ5T0W9 1011 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 IFNL1Q8IU54 200 aa17.7■□□□□ 0.42
VAC14-211ENST00000568886 RBM28Q9NW13 759 aaKnown RBP17.7■□□□□ 0.42
VAC14-211ENST00000568886 TFIP11Q9UBB9 837 aaKnown RBP17.7■□□□□ 0.42
VAC14-211ENST00000568886 AOC2O75106 756 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 SMARCA1P28370 1054 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 GNAQP50148 359 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 C17orf53Q8N3J3 647 aaPredicted RBP17.69■□□□□ 0.42
VAC14-211ENST00000568886 CTCFLQ8NI51 663 aaPredicted RBP17.69■□□□□ 0.42
VAC14-211ENST00000568886 GTF3C2Q8WUA4 911 aaPredicted RBP17.69■□□□□ 0.42
VAC14-211ENST00000568886 CHURC1Q8WUH1 139 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 LZTS2Q9BRK4 669 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 OSBPP22059 807 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
VAC14-211ENST00000568886 CCDC96Q2M329 555 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 PGBD1Q96JS3 809 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 ZIC5Q96T25 663 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 CBX8Q9HC52 389 aa17.69■□□□□ 0.42
VAC14-211ENST00000568886 CCDC196A0A1B0GTZ2 297 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 IGF2BP3O00425 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
VAC14-211ENST00000568886 RAD21O60216 631 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 FDX1P10109 184 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 STAT2P52630 851 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 GRM1Q13255 1194 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 ANO6Q4KMQ2 910 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 LUZP1Q86V48 1076 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
VAC14-211ENST00000568886 PDHXO00330 501 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 PFKFB2O60825 505 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 CAVIN2O95810 425 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 METAP2P50579 478 aaKnown RBP eCLIP17.67■□□□□ 0.42
VAC14-211ENST00000568886 COG2Q14746 738 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 CKAP2LQ8IYA6 745 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 DNAJC5GQ8N7S2 189 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 CHMP4CQ96CF2 233 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 PARK7Q99497 189 aaKnown RBP17.67■□□□□ 0.42
VAC14-211ENST00000568886 NUP88Q99567 741 aaPredicted RBP17.67■□□□□ 0.42
VAC14-211ENST00000568886 CFHR5Q9BXR6 569 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 HOXC10Q9NYD6 342 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 CFAP45Q9UL16 551 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 PYCARDQ9ULZ3 195 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 GOLGA8AA7E2F4 631 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 RTN1Q16799 776 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 KCTD1Q719H9 257 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 PRPF38AQ8NAV1 312 aaKnown RBP17.67■□□□□ 0.42
VAC14-211ENST00000568886 SPC24Q8NBT2 197 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 SLF1Q9BQI6 1058 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 MYL10Q9BUA6 226 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 ASCC2Q9H1I8 757 aaPredicted RBP17.67■□□□□ 0.42
VAC14-211ENST00000568886 PPP1R9AQ9ULJ8 1098 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
VAC14-211ENST00000568886 TMEM232C9JQI7 657 aa17.66■□□□□ 0.42
VAC14-211ENST00000568886 H3BQV1 296 aa17.66■□□□□ 0.42
VAC14-211ENST00000568886 NR1I2O75469 434 aa17.66■□□□□ 0.42
VAC14-211ENST00000568886 DSG3P32926 999 aa17.66■□□□□ 0.42
VAC14-211ENST00000568886 IRX3P78415 501 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms