RNA–Protein interactions for RNA: ENST00000568839.5

E2F4-212, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-212ENST00000568839 RRP1P56182 461 aaKnown RBP13.42□□□□□ -0.26
E2F4-212ENST00000568839 TICAM2Q86XR7 235 aa13.42□□□□□ -0.26
E2F4-212ENST00000568839 TOX2Q96NM4 488 aa13.42□□□□□ -0.26
E2F4-212ENST00000568839 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
E2F4-212ENST00000568839 TOMM22Q9NS69 142 aa13.42□□□□□ -0.26
E2F4-212ENST00000568839 HOMER2Q9NSB8 354 aa13.42□□□□□ -0.26
E2F4-212ENST00000568839 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.42□□□□□ -0.26
E2F4-212ENST00000568839 ELP1O95163 1332 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 ASB14A6NK59 587 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 PLA2G6O60733 806 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 ADAMTS4O75173 837 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 MCCP23508 829 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 SHHQ15465 462 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 KCNA10Q16322 511 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 CCDC144BQ3MJ40 725 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
E2F4-212ENST00000568839 ARMCX2Q7L311 632 aa13.41□□□□□ -0.26
E2F4-212ENST00000568839 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
E2F4-212ENST00000568839 TRIM43BA6NCK2 446 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 KIAA0355O15063 1070 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
E2F4-212ENST00000568839 FPGSQ05932 587 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 AAMPQ13685 434 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 GNASQ5JWF2 1037 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 ANKRD33Q7Z3H0 272 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 CCDC144CPQ8IYA2 1237 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 KLHDC9Q8NEP7 349 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 TRIM43Q96BQ3 446 aaPredicted RBP13.4□□□□□ -0.26
E2F4-212ENST00000568839 TRERF1Q96PN7 1200 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 RNF146Q9NTX7 359 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 COL6A3P12111 3177 aa13.4□□□□□ -0.26
E2F4-212ENST00000568839 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
E2F4-212ENST00000568839 ASGR1P07306 291 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 ALAS1P13196 640 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
E2F4-212ENST00000568839 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
E2F4-212ENST00000568839 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 MCMDC2Q4G0Z9 681 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 CCDC129Q6ZRS4 1044 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 KCTD1Q719H9 257 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
E2F4-212ENST00000568839 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
E2F4-212ENST00000568839 FAM161BQ96MY7 647 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 PNMA2Q9UL42 364 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 MTMR7Q9Y216 660 aa13.39□□□□□ -0.27
E2F4-212ENST00000568839 A0A0U1RQG5 324 aaPredicted RBP13.38□□□□□ -0.27
E2F4-212ENST00000568839 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 ORC4O43929 436 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 ZEB2O60315 1214 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 PDE1AP54750 535 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 GJA9P57773 515 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 TNFAIP2Q03169 654 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 FAAP100Q0VG06 881 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
E2F4-212ENST00000568839 ALX1Q15699 326 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 RRP12Q5JTH9 1297 aaKnown RBP13.38□□□□□ -0.27
E2F4-212ENST00000568839 C9orf50Q5SZB4 431 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 FAM133AQ8N9E0 248 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 ADD3Q9UEY8 706 aaKnown RBP13.38□□□□□ -0.27
E2F4-212ENST00000568839 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
E2F4-212ENST00000568839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
E2F4-212ENST00000568839 CABYRO75952 493 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 TIMP1P01033 207 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
E2F4-212ENST00000568839 CNTN2Q02246 1040 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 MPHOSPH6Q99547 160 aaKnown RBP13.37□□□□□ -0.27
E2F4-212ENST00000568839 SEZ6LQ9BYH1 1024 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
E2F4-212ENST00000568839 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
E2F4-212ENST00000568839 IL17RBQ9NRM6 502 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 ZNF536O15090 1300 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 SALL3Q9BXA9 1300 aa13.37□□□□□ -0.27
E2F4-212ENST00000568839 ARVCFO00192 962 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 NMT2O60551 498 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 FGAP02671 866 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 ICAM1P05362 532 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
E2F4-212ENST00000568839 PPIGQ13427 754 aaKnown RBP eCLIP13.36□□□□□ -0.272e-9■■■□□ 14.9
E2F4-212ENST00000568839 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 CCSAPQ6IQ19 270 aaPredicted RBP13.36□□□□□ -0.27
E2F4-212ENST00000568839 NSMFQ6X4W1 530 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 MFSD6Q6ZSS7 791 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 TMEM199Q8N511 208 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 RILPL2Q969X0 211 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
E2F4-212ENST00000568839 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
E2F4-212ENST00000568839 RNF41Q9H4P4 317 aaPredicted RBP13.36□□□□□ -0.27
E2F4-212ENST00000568839 TCP11L1Q9NUJ3 509 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms