RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 CCDC178Q5BJE1 867 aa19.24■□□□□ 0.67
VAC14-210ENST00000568548 KIAA1328Q86T90 577 aa19.24■□□□□ 0.67
VAC14-210ENST00000568548 LUC7L2Q9Y383 392 aaKnown RBP19.24■□□□□ 0.67
VAC14-210ENST00000568548 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
VAC14-210ENST00000568548 RTL9Q8NET4 1388 aa19.24■□□□□ 0.67
VAC14-210ENST00000568548 MYO1CO00159 1063 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 MEX3CQ5U5Q3 659 aaKnown RBP19.23■□□□□ 0.67
VAC14-210ENST00000568548 CAGE1Q8TC20 777 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 TTF2Q9UNY4 1162 aaKnown RBP19.23■□□□□ 0.67
VAC14-210ENST00000568548 CNTNAP4Q9C0A0 1308 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 ECM29Q5VYK3 1845 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 TRIM21P19474 475 aaKnown RBP19.23■□□□□ 0.67
VAC14-210ENST00000568548 TFAP4Q01664 338 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 TTC19Q6DKK2 380 aaPredicted RBP19.23■□□□□ 0.67
VAC14-210ENST00000568548 JADE2Q9NQC1 790 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 EHD2Q9NZN4 543 aa19.23■□□□□ 0.67
VAC14-210ENST00000568548 SAP30BPQ9UHR5 308 aaKnown RBP19.23■□□□□ 0.67
VAC14-210ENST00000568548 MYBL2P10244 700 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 FCER1AP12319 257 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 TBC1D9BQ66K14 1250 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 ANKRD18AQ8IVF6 992 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 ANKRD20A12PQ8NF67 263 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 BAZ2AQ9UIF9 1905 aaKnown RBP19.22■□□□□ 0.67
VAC14-210ENST00000568548 HERVK_113P62684 666 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 WDR59Q6PJI9 974 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 ELOA2Q8IYF1 753 aaPredicted RBP19.22■□□□□ 0.67
VAC14-210ENST00000568548 NAA15Q9BXJ9 866 aaKnown RBP19.22■□□□□ 0.67
VAC14-210ENST00000568548 DCP1AQ9NPI6 582 aaPredicted RBP19.22■□□□□ 0.67
VAC14-210ENST00000568548 RWDD2AQ9UIY3 292 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 COL4A1P02462 1669 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 BCORQ6W2J9 1755 aa19.22■□□□□ 0.67
VAC14-210ENST00000568548 ATP8B1O43520 1251 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 UBA7P41226 1012 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 EZH2Q15910 746 aaKnown RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 NAALADL2Q58DX5 795 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 LIMA1Q9UHB6 759 aaKnown RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 GNPATO15228 680 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 DNAJC21Q5F1R6 531 aaKnown RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 ZNF658Q5TYW1 1059 aaPredicted RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 FAM204AQ9H8W3 233 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 CCNL1Q9UK58 526 aaPredicted RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 MINPP1Q9UNW1 487 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 COL1A1P02452 1464 aaPredicted RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 ZNF831Q5JPB2 1677 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 C2orf54Q08AI8 447 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 DIXDC1Q155Q3 683 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 ENOX2Q16206 610 aaKnown RBP19.21■□□□□ 0.67
VAC14-210ENST00000568548 MB21D1Q8N884 522 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 OR8K1Q8NGG5 319 aa19.21■□□□□ 0.67
VAC14-210ENST00000568548 CCDC194A0A1B0GVG4 234 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 TULP2O00295 520 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 PDE2AO00408 941 aaPredicted RBP19.2■□□□□ 0.66
VAC14-210ENST00000568548 EIF3JO75822 258 aaKnown RBP19.2■□□□□ 0.66
VAC14-210ENST00000568548 ACTN2P35609 894 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 RRP15Q9Y3B9 282 aaKnown RBP19.2■□□□□ 0.66
VAC14-210ENST00000568548 BTAF1O14981 1849 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 SLC7A5Q01650 507 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 TSR1Q2NL82 804 aaKnown RBP19.2■□□□□ 0.66
VAC14-210ENST00000568548 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 BLIDQ8IZY5 108 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 CSGALNACT2Q8N6G5 542 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 HDAC7Q8WUI4 952 aa19.2■□□□□ 0.66
VAC14-210ENST00000568548 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 STK4Q13043 487 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 DTHD1Q6ZMT9 781 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 EXOC4Q96A65 974 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 GJD4Q96KN9 370 aaPredicted RBP19.19■□□□□ 0.66
VAC14-210ENST00000568548 KANSL2Q9H9L4 492 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 FAM207AQ9NSI2 230 aaPredicted RBP19.19■□□□□ 0.66
VAC14-210ENST00000568548 TBC1D8BQ0IIM8 1120 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 SLC35G1Q2M3R5 365 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 RC3H1Q5TC82 1133 aaKnown RBP19.19■□□□□ 0.66
VAC14-210ENST00000568548 RCSD1Q6JBY9 416 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 GJA10Q969M2 543 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 NSUN4Q96CB9 384 aaKnown RBP19.19■□□□□ 0.66
VAC14-210ENST00000568548 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 TAF1P21675 1872 aa19.19■□□□□ 0.66
VAC14-210ENST00000568548 LAMB2P55268 1798 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 EHD4Q9H223 541 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 RASSF4Q9H2L5 321 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 KAT14Q9H8E8 782 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 SLC39A2Q9NP94 309 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 DISC1Q9NRI5 854 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 ARAP2Q8WZ64 1704 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 AMPD2Q01433 879 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 GRIK5Q16478 980 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 PFKFB3Q16875 520 aaPredicted RBP19.18■□□□□ 0.66
VAC14-210ENST00000568548 CCDC155Q8N6L0 562 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 MSANTD4Q8NCY6 345 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 PNMA1Q8ND90 353 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 IL17RBQ9NRM6 502 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 CWC15Q9P013 229 aaKnown RBP19.18■□□□□ 0.66
VAC14-210ENST00000568548 TECP42680 631 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 MTIF2P46199 727 aaKnown RBP19.18■□□□□ 0.66
VAC14-210ENST00000568548 DYMQ7RTS9 669 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 CCDC148Q8NFR7 591 aa19.18■□□□□ 0.66
VAC14-210ENST00000568548 GOLGA5Q8TBA6 731 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms