RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
CMTM3-215ENST00000568477 CTNNA3Q9UI47 895 aa17■□□□□ 0.31
CMTM3-215ENST00000568477 PRR12Q9ULL5 1215 aa17■□□□□ 0.31
CMTM3-215ENST00000568477 ZMYND8Q9ULU4 1186 aaPredicted RBP17■□□□□ 0.31
CMTM3-215ENST00000568477 LAMA4Q16363 1823 aa17■□□□□ 0.31
CMTM3-215ENST00000568477 ZNF536O15090 1300 aa16.99■□□□□ 0.31
CMTM3-215ENST00000568477 SYNGAP1Q96PV0 1343 aa16.99■□□□□ 0.31
CMTM3-215ENST00000568477 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-215ENST00000568477 RARBP10826 455 aa16.99■□□□□ 0.31
CMTM3-215ENST00000568477 TAL1P17542 331 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-215ENST00000568477 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
CMTM3-215ENST00000568477 LRRC26Q2I0M4 334 aa16.99■□□□□ 0.31
CMTM3-215ENST00000568477 GJC2Q5T442 439 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-215ENST00000568477 ZNF467Q7Z7K2 595 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-215ENST00000568477 AGBL1Q96MI9 1066 aa16.99■□□□□ 0.31
CMTM3-215ENST00000568477 PRO3102Q9H379 93 aa16.99■□□□□ 0.31
CMTM3-215ENST00000568477 RAD50Q92878 1312 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 ZNF865P0CJ78 1059 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-215ENST00000568477 ALAS1P13196 640 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 AKR1A1P14550 325 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 SNAP25P60880 206 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 CCDC178Q5BJE1 867 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 SYDE2Q5VT97 1194 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 MAMDC4Q6UXC1 1216 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
CMTM3-215ENST00000568477 FRMPD2Q68DX3 1309 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-215ENST00000568477 POTEB2H3BUK9 544 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 KDM4AO75164 1064 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 PDHBP11177 359 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 SYN1P17600 705 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 SLC16A2P36021 539 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 FXR1P51114 621 aaKnown RBP eCLIP16.97■□□□□ 0.31
CMTM3-215ENST00000568477 LRRC41Q15345 812 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 TTBK2Q6IQ55 1244 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 ZKSCAN3Q9BRR0 538 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 GPCPD1Q9NPB8 672 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 A1CFQ9NQ94 594 aaKnown RBP16.97■□□□□ 0.31
CMTM3-215ENST00000568477 XPNPEP3Q9NQH7 507 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-215ENST00000568477 CCPG1Q9ULG6 757 aa16.97■□□□□ 0.31
CMTM3-215ENST00000568477 RANBP2P49792 3224 aaKnown RBP16.97■□□□□ 0.31
CMTM3-215ENST00000568477 SMCHD1A6NHR9 2005 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 B4E1Z4 1266 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 SNAI1O95863 264 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-215ENST00000568477 ICAM1P05362 532 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 ATN1P54259 1190 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-215ENST00000568477 ZNF543Q08ER8 600 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 DGKHQ86XP1 1220 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 FGD4Q96M96 766 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 IL25Q9H293 177 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 RANBP17Q9H2T7 1088 aaKnown RBP16.96■□□□□ 0.31
CMTM3-215ENST00000568477 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-215ENST00000568477 FAM184BQ9ULE4 1060 aa16.96■□□□□ 0.31
CMTM3-215ENST00000568477 A0A1W2PPC1 479 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 SNHG28P0DPA3 235 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 CHMLP26374 656 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 CNTN2Q02246 1040 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 ARMCX2Q7L311 632 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 RNF180Q86T96 592 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 FAM133AQ8N9E0 248 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 GDF15Q99988 308 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 KRT23Q9C075 422 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
CMTM3-215ENST00000568477 PGK1P00558 417 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 ADCYAP1R1P41586 468 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 RTP1P59025 263 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 ACVR2BQ13705 512 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 MUM1L1Q5H9M0 696 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 GPATCH4Q5T3I0 446 aaKnown RBP16.94■□□□□ 0.3
CMTM3-215ENST00000568477 PNMA1Q8ND90 353 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 LENG1Q96BZ8 264 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-215ENST00000568477 ZSCAN10Q96SZ4 725 aaPredicted RBP16.94■□□□□ 0.3
CMTM3-215ENST00000568477 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 PNMA2Q9UL42 364 aa16.94■□□□□ 0.3
CMTM3-215ENST00000568477 MAGEA10P43363 369 aaPredicted RBP16.93■□□□□ 0.3
CMTM3-215ENST00000568477 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 SLC39A5Q6ZMH5 540 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 ANKS1AQ92625 1134 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 FERMT2Q96AC1 680 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 ZSWIM5Q9P217 1185 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 PHF24Q9UPV7 400 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 ATP11BQ9Y2G3 1177 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 MCM3APO60318 1980 aa16.93■□□□□ 0.3
CMTM3-215ENST00000568477 SOWAHBA6NEL2 793 aa16.92■□□□□ 0.3
CMTM3-215ENST00000568477 ASB14A6NK59 587 aa16.92■□□□□ 0.3
CMTM3-215ENST00000568477 BMP8BP34820 402 aa16.92■□□□□ 0.3
CMTM3-215ENST00000568477 ENAHQ8N8S7 591 aaPredicted RBP16.92■□□□□ 0.3
CMTM3-215ENST00000568477 CYP39A1Q9NYL5 469 aa16.92■□□□□ 0.3
CMTM3-215ENST00000568477 TNKSO95271 1327 aa16.92■□□□□ 0.3
CMTM3-215ENST00000568477 SYNRGQ9UMZ2 1314 aa16.92■□□□□ 0.3
CMTM3-215ENST00000568477 ADAMTS4O75173 837 aa16.91■□□□□ 0.3
CMTM3-215ENST00000568477 DUSP11O75319 330 aaKnown RBP16.91■□□□□ 0.3
CMTM3-215ENST00000568477 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms