RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	EDC4	Q6P2E9	1401 aa	Known RBP	18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	SLC1A4	P43007	532 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	CUL4A	Q13619	759 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	MAEA	Q7L5Y9	396 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	TRIM42	Q8IWZ5	723 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	TUBB6	Q9BUF5	446 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	EPB41L5	Q9HCM4	733 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	MAST3	O60307	1309 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	hCG_1642624	A0A1W2PR95	340 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	OR52Z1	P0C646	297 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	MAGEA9	P43362	315 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	LMNB2	Q03252	620 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	NXN	Q6DKJ4	435 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	NSMCE1	Q8WV22	266 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	ENC1	O14682	589 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	SKI	P12755	728 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	GUCY2C	P25092	1073 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	HNRNPH2	P55795	449 aa	Known RBP	18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	CLIC6	Q96NY7	704 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	ANTXR1	Q9H6X2	564 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	POLR3E	Q9NVU0	708 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	PNMA6A	P0CW24	399 aa	Predicted RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	EIF6	P56537	245 aa	Known RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	RASSF7	Q02833	373 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	TAF12	Q16514	161 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ARHGEF18	Q6ZSZ5	1173 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ANKRD35	Q8N283	1001 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	FANCB	Q8NB91	859 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	TRPC6	Q9Y210	931 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	GOLGA8Q	A0A0J9YX86	632 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	GOLGA8O	A6NCC3	632 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	GOLGA8N	F8WBI6	632 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	CTNND1	O60716	968 aa	Known RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	TAF11	Q15544	211 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	MMS22L	Q6ZRQ5	1243 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	C11orf57	Q6ZUT1	292 aa	Predicted RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	TEKT1	Q969V4	418 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	TUBGCP2	Q9BSJ2	902 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ABCC10	Q5T3U5	1492 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	NNT	Q13423	1086 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	CASP8	Q14790	479 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ANKRD20A4	Q4UJ75	823 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ANKRD20A8P	Q5CZ79	823 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ANKRD20A2	Q5SQ80	823 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ANKRD20A1	Q5TYW2	823 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	TRIM6	Q9C030	488 aa	Predicted RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	DAAM1	Q9Y4D1	1078 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	PDE6C	P51160	858 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	RBL2	Q08999	1139 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	FBXO38	Q6PIJ6	1188 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	SCYL3	Q8IZE3	742 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	N4BP2L2	Q92802	583 aa	Predicted RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ACSBG1	Q96GR2	724 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	CNOT6L	Q96LI5	555 aa	Known RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	LSG1	Q9H089	658 aa	Known RBP	18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	CUEDC2	Q9H467	287 aa		18.15	■□□□□ 0.5
TSC2-222	ENST00000568454	ADGRL2	O95490	1459 aa		18.14	■□□□□ 0.5
TSC2-222	ENST00000568454	CEBPA	P49715	358 aa	Predicted RBP	18.14	■□□□□ 0.5
TSC2-222	ENST00000568454	TFAP4	Q01664	338 aa		18.14	■□□□□ 0.5
TSC2-222	ENST00000568454	DPCR1	Q3MIW9	517 aa		18.14	■□□□□ 0.5
TSC2-222	ENST00000568454	SDCCAG3	Q96C92	435 aa		18.14	■□□□□ 0.5
TSC2-222	ENST00000568454	PANK4	Q9NVE7	773 aa		18.14	■□□□□ 0.5
TSC2-222	ENST00000568454	TMCO4	Q5TGY1	634 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	CCHCR1	Q8TD31	782 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	WHAMM	Q8TF30	809 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	SYMPK	Q92797	1274 aa	Known RBP	18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	TMOD4	Q9NZQ9	345 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	P4HA1	P13674	534 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	TNNI1	P19237	187 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	LMNB1	P20700	586 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	PDIA3	P30101	505 aa	Known RBP	18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	CYP2J2	P51589	502 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	ANKRD13C	Q8N6S4	541 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	STAP2	Q9UGK3	403 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	BTBD18	B2RXH4	712 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	PGRMC1	O00264	195 aa	Known RBP	18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	ADD1	P35611	737 aa	Known RBP	18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	PPP2R5C	Q13362	524 aa		18.14	■□□□□ 0.49
TSC2-222	ENST00000568454	HSPD1	P10809	573 aa	Known RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	BFSP1	Q12934	665 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	RTCB	Q9Y3I0	505 aa	Known RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	FAM26F	Q5R3K3	315 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	BSPRY	Q5W0U4	402 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	ADAT2	Q7Z6V5	191 aa	Known RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	GC	P02774	474 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	SCRN1	Q12765	414 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	PDCD7	Q8N8D1	485 aa	Known RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	MAGOHB	Q96A72	148 aa	Known RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	DHTKD1	Q96HY7	919 aa	Predicted RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	NR1D1	P20393	614 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	GARS	P41250	739 aa	Known RBP	18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	ESRRG	P62508	458 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	SLMAP	Q14BN4	828 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	DDB1	Q16531	1140 aa		18.13	■□□□□ 0.49
TSC2-222	ENST00000568454	RDH13	Q8NBN7	331 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms