RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
CDH11-214ENST00000568340 PIBF1Q8WXW3 757 aa11.93□□□□□ -0.5
CDH11-214ENST00000568340 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
CDH11-214ENST00000568340 SLF1Q9BQI6 1058 aa11.93□□□□□ -0.5
CDH11-214ENST00000568340 FOXP1Q9H334 677 aaPredicted RBP11.93□□□□□ -0.5
CDH11-214ENST00000568340 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
CDH11-214ENST00000568340 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
CDH11-214ENST00000568340 SPDYE16A6NNV3 312 aaPredicted RBP11.92□□□□□ -0.5
CDH11-214ENST00000568340 H3BQV1 296 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 DSG3P32926 999 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 TOB1P50616 345 aaPredicted RBP11.92□□□□□ -0.5
CDH11-214ENST00000568340 SNAP25P60880 206 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 AKAP17AQ02040 695 aaKnown RBP11.92□□□□□ -0.5
CDH11-214ENST00000568340 DNM1Q05193 864 aaKnown RBP11.92□□□□□ -0.5
CDH11-214ENST00000568340 MYSM1Q5VVJ2 828 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 HEATR3Q7Z4Q2 680 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 RASAL3Q86YV0 1011 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 COA7Q96BR5 231 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 FTOQ9C0B1 505 aaKnown RBP eCLIP11.92□□□□□ -0.5
CDH11-214ENST00000568340 VAT1LQ9HCJ6 419 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 ZNF214Q9UL59 606 aaPredicted RBP11.92□□□□□ -0.5
CDH11-214ENST00000568340 PCDHA4Q9UN74 947 aa11.92□□□□□ -0.5
CDH11-214ENST00000568340 ATP2A1O14983 1001 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 GALNT17Q6IS24 598 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 BRAPQ7Z569 592 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 SAPCD2Q86UD0 394 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 NOSTRINQ8IVI9 506 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 CHURC1Q8WUH1 139 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 CRYGNQ8WXF5 182 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 USP28Q96RU2 1077 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 ZNF408Q9H9D4 720 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 SEC63Q9UGP8 760 aaKnown RBP11.91□□□□□ -0.5
CDH11-214ENST00000568340 AGTPBP1Q9UPW5 1226 aa11.91□□□□□ -0.5
CDH11-214ENST00000568340 RBBP6Q7Z6E9 1792 aaKnown RBP11.91□□□□□ -0.5
CDH11-214ENST00000568340 TESPA1A2RU30 521 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 SMCHD1A6NHR9 2005 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 VWA5AO00534 786 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 MEIS2O14770 477 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 RAD21O60216 631 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 ICAM1P05362 532 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 ZBTB48P10074 688 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 KRT2P35908 639 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 NASPP49321 788 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 BLIDQ8IZY5 108 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 PRPF38AQ8NAV1 312 aaKnown RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 SMC1BQ8NDV3 1235 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 RASGRP4Q8TDF6 673 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 CLEC4DQ8WXI8 215 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 BRI3BPQ8WY22 251 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 RIC8AQ9NPQ8 531 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 PCDHA6Q9UN73 950 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 CNPY2Q9Y2B0 182 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 PCDHA8Q9Y5H6 950 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 TLL2Q9Y6L7 1015 aa11.9□□□□□ -0.5
CDH11-214ENST00000568340 MORC2Q9Y6X9 1032 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 COL11A1P12107 1806 aaPredicted RBP11.9□□□□□ -0.5
CDH11-214ENST00000568340 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 CNMDO75829 334 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 FLOT1O75955 427 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 CALML3P27482 149 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 MCM4P33991 863 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 OAZ1P54368 228 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 NAPAP54920 295 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 PTPAQ15257 358 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 NFKBIBQ15653 356 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
CDH11-214ENST00000568340 C2orf69Q8N8R5 385 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 TANGO6Q9C0B7 1094 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 POLR3EQ9NVU0 708 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 PCDHA1Q9Y5I3 950 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 THSD7BQ9C0I4 1608 aa11.89□□□□□ -0.51
CDH11-214ENST00000568340 ELP1O95163 1332 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 FRMPD4Q14CM0 1322 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 LCTP09848 1927 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 SMCO2A6NFE2 343 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 SLC10A3P09131 477 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 FDX1P10109 184 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 XBP1P17861 261 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 NLRP5P59047 1200 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 HTRA3P83110 453 aa11.88□□□□□ -0.51
CDH11-214ENST00000568340 SNAPC2Q13487 334 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms