RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 APOBRQ0VD83 1088 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 CUL4AQ13619 759 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 WTAPQ15007 396 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 SGMS1Q86VZ5 419 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 FOXP4Q8IVH2 680 aaPredicted RBP10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 TMTC2Q8N394 836 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 IGDCC4Q8TDY8 1250 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 MYLIPQ8WY64 445 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 CHMP4CQ96CF2 233 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 ZNF274Q96GC6 653 aaPredicted RBP10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 ZSCAN10Q96SZ4 725 aaPredicted RBP10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 LY9Q9HBG7 655 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 PRKAG2Q9UGJ0 569 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 RAPGEFL1Q9UHV5 662 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 PNMA3Q9UL41 463 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 TPCN1Q9ULQ1 816 aa10.03□□□□□ -0.8
KLHDC4-220ENST00000568338 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 GOLGA8BA8MQT2 603 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 LARGE1O95461 756 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 TFAP4Q01664 338 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 TRIM32Q13049 653 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 MFSD10Q14728 455 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 ME3Q16798 604 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 FAM110CQ1W6H9 321 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 LRRC26Q2I0M4 334 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 FAM47AQ5JRC9 791 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 IFIT1BQ5T764 474 aaKnown RBP10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 NFXL1Q6ZNB6 911 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 METTL16Q86W50 562 aaKnown RBP10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 SCYL3Q8IZE3 742 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 INTS4Q96HW7 963 aaKnown RBP10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 CCDC17Q96LX7 622 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 ZKSCAN3Q9BRR0 538 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 LARP6Q9BRS8 491 aaKnown RBP10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 SLKQ9H2G2 1235 aaPredicted RBP10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 SEMA6BQ9H3T3 888 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 TCP11L1Q9NUJ3 509 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 NAP1L2Q9ULW6 460 aaPredicted RBP10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 TTC28Q96AY4 2481 aa10.02□□□□□ -0.81
KLHDC4-220ENST00000568338 TRIM75PA6NK02 468 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 COL6A1P12109 1028 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 PTPRAP18433 802 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 SHMT1P34896 483 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 RCAN1P53805 252 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 SEC23AQ15436 765 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 APOA5Q6Q788 366 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 SYNE3Q6ZMZ3 975 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 CCDC83Q8IWF9 413 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 ENAHQ8N8S7 591 aaPredicted RBP10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 NEDD1Q8NHV4 660 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 GTF3C6Q969F1 213 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 DNAJC18Q9H819 358 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 AGTPBP1Q9UPW5 1226 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 SLC12A7Q9Y666 1083 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 NID2Q14112 1375 aa10.01□□□□□ -0.81
KLHDC4-220ENST00000568338 ZBTB43O43298 467 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 DHX16O60231 1041 aaKnown RBP10□□□□□ -0.81
KLHDC4-220ENST00000568338 TBC1D12O60347 775 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 PFKFB2O60825 505 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 PDIA3P30101 505 aaKnown RBP10□□□□□ -0.81
KLHDC4-220ENST00000568338 GCLCP48506 637 aaPredicted RBP10□□□□□ -0.81
KLHDC4-220ENST00000568338 STK3Q13188 491 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 CERKLQ49MI3 558 aaPredicted RBP10□□□□□ -0.81
KLHDC4-220ENST00000568338 TATDN1Q6P1N9 297 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 MICU3Q86XE3 530 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 DGKHQ86XP1 1220 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 TRIB2Q92519 343 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
KLHDC4-220ENST00000568338 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10□□□□□ -0.81
KLHDC4-220ENST00000568338 CWC22Q9HCG8 908 aaKnown RBP10□□□□□ -0.81
KLHDC4-220ENST00000568338 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 AFG3L2Q9Y4W6 797 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 ATAD5Q96QE3 1844 aa10□□□□□ -0.81
KLHDC4-220ENST00000568338 FAM196BA6NMK8 535 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 GOLGA8AA7E2F4 631 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 MPHOSPH10O00566 681 aaKnown RBP9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 NMT2O60551 498 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 DDAH1O94760 285 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 CALM1P0DP23 149 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 CALM2P0DP24 149 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 CALM3P0DP25 149 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 AKR1B1P15121 316 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 METAP2P50579 478 aaKnown RBP eCLIP9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 ST3GAL1Q11201 340 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 SCRN1Q12765 414 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 PABPC4Q13310 644 aaKnown RBP eCLIP9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 MAP3K21Q5TCX8 1036 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 CATIPQ7Z7H3 387 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 ZNF654Q8IZM8 581 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms