RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BICDL2A1A5D9 508 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
PALB2-206ENST00000568219 LLGL1Q15334 1064 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 CRACR2BQ8N4Y2 399 aaPredicted RBP12.08□□□□□ -0.48
PALB2-206ENST00000568219 NUP58Q9BVL2 599 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
PALB2-206ENST00000568219 GGT7Q9UJ14 662 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 TMOD1P28289 359 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 ELF1P32519 619 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 BICDL1Q6ZP65 573 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 DAAM2Q86T65 1068 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 RNPC3Q96LT9 517 aaKnown RBP12.08□□□□□ -0.48
PALB2-206ENST00000568219 AP1M1Q9BXS5 423 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 PPP1R12CQ9BZL4 782 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 HAUS2Q9NVX0 235 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 PLAAQ9Y263 795 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 FGFR1OPO95684 399 aaKnown RBP12.08□□□□□ -0.48
PALB2-206ENST00000568219 LSP1P33241 339 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 TXKP42681 527 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 MYO1EQ12965 1108 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 TRMT1LQ7Z2T5 733 aaKnown RBP12.08□□□□□ -0.48
PALB2-206ENST00000568219 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 NELFCDQ8IXH7 590 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 VIPAS39Q9H9C1 493 aa12.08□□□□□ -0.48
PALB2-206ENST00000568219 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 UQCRFS1P1P0C7P4 283 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 ZNF18P17022 549 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 CARSP49589 748 aaKnown RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 RUFY4Q6ZNE9 571 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 ZIM3Q96PE6 472 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 TRIM6Q9C030 488 aaPredicted RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 PCDHA13Q9Y5I0 950 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 GSTTP1A0A1W2PQM5 241 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 TMEM110-MUSTN1A8MSY1 372 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 CTNND1O60716 968 aaKnown RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 HDLBPQ00341 1268 aaKnown RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 BIRC2Q13490 618 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 RPS6KA1Q15418 735 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 SIRT1Q96EB6 747 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 PIH1D3Q9NQM4 214 aaKnown RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 CPSF2Q9P2I0 782 aaKnown RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 RWDD2AQ9UIY3 292 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 RNF225M0QZC1 329 aaPredicted RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
PALB2-206ENST00000568219 ADCY1Q08828 1119 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 INF2Q27J81 1249 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 SLC9C1Q4G0N8 1177 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 ALS2CLQ60I27 953 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 OSBPL9Q96SU4 736 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
PALB2-206ENST00000568219 PLEKP08567 350 aaPredicted RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 PCK1P35558 622 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 MCAMP43121 646 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 KIF11P52732 1056 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 WDR93Q6P2C0 686 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 ZNF473Q8WTR7 871 aaKnown RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 CTNNBL1Q8WYA6 563 aaPredicted RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 KAT2BQ92831 832 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 LRRC45Q96CN5 670 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 PRDM11Q9NQV5 511 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 SEC31BQ9NQW1 1179 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 ZSCAN5CA6NGD5 496 aaPredicted RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 PPP1R37O75864 691 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 PLEKHA8P1O95397 391 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 SLCO1A2P46721 670 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 TOB1P50616 345 aaPredicted RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 LRRC41Q15345 812 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 ZNF658Q5TYW1 1059 aaPredicted RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 EMBQ6PCB8 327 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 CCDC63Q8NA47 563 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 HPS3Q969F9 1004 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 MAP3K14Q99558 947 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 KANSL2Q9H9L4 492 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 LY9Q9HBG7 655 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 BAZ2BQ9UIF8 2168 aaKnown RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
PALB2-206ENST00000568219 ZBED6P86452 979 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 KLHL30Q0D2K2 578 aa12.06□□□□□ -0.48
PALB2-206ENST00000568219 MAGEB6P1A0A0J9YX57 407 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 ENO4A6NNW6 628 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 POLR2FP61218 127 aaKnown RBP12.05□□□□□ -0.48
PALB2-206ENST00000568219 GFPT1Q06210 699 aaPredicted RBP12.05□□□□□ -0.48
PALB2-206ENST00000568219 VPS36Q86VN1 386 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 FAM167BQ9BTA0 163 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 ADGRL3Q9HAR2 1447 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 PPRC1Q5VV67 1664 aaKnown RBP12.05□□□□□ -0.48
PALB2-206ENST00000568219 KRIT1O00522 736 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
PALB2-206ENST00000568219 STARD3NLO95772 234 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 KIF5BP33176 963 aa12.05□□□□□ -0.48
PALB2-206ENST00000568219 ADD2P35612 726 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms