RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 DPP9Q86TI2 863 aa15.21■□□□□ 0.03
CNOT1-213ENST00000568158 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
CNOT1-213ENST00000568158 TRIB2Q92519 343 aa15.21■□□□□ 0.03
CNOT1-213ENST00000568158 TCEANC2Q96MN5 208 aa15.21■□□□□ 0.03
CNOT1-213ENST00000568158 MMP19Q99542 508 aa15.21■□□□□ 0.03
CNOT1-213ENST00000568158 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
CNOT1-213ENST00000568158 SH2B2O14492 632 aaPredicted RBP15.2■□□□□ 0.02
CNOT1-213ENST00000568158 INHAP05111 366 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 PGK2P07205 417 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 XRCC5P13010 732 aaKnown RBP15.2■□□□□ 0.02
CNOT1-213ENST00000568158 ALAS1P13196 640 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 OAZ1P54368 228 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 TMEM87BQ96K49 555 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 RANBP17Q9H2T7 1088 aaKnown RBP15.2■□□□□ 0.02
CNOT1-213ENST00000568158 HOMER2Q9NSB8 354 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 MAD2L2Q9UI95 211 aa15.2■□□□□ 0.02
CNOT1-213ENST00000568158 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 PALM3A6NDB9 673 aaPredicted RBP15.19■□□□□ 0.02
CNOT1-213ENST00000568158 KLRF2D3W0D1 207 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 UBXN2AP68543 259 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 TROAPQ12815 778 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 KRT32Q14532 448 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 NFXL1Q6ZNB6 911 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 DHX32Q7L7V1 743 aaKnown RBP15.19■□□□□ 0.02
CNOT1-213ENST00000568158 ADGRF4Q8IZF3 695 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 ABRAQ8N0Z2 381 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 TMTC2Q8N394 836 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 TRERF1Q96PN7 1200 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 MTA3Q9BTC8 594 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 MYL10Q9BUA6 226 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 UNC93B1Q9H1C4 597 aa15.19■□□□□ 0.02
CNOT1-213ENST00000568158 SEC24BO95487 1268 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 HOXC6P09630 235 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 CCL5P13501 91 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 COPB2P35606 906 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 KCTD2Q14681 263 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 GRM4Q14833 912 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 MUM1L1Q5H9M0 696 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 RAB11FIP4Q86YS3 637 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 CHST13Q8NET6 341 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 DDX11Q96FC9 970 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 JAKMIP1Q96N16 626 aaKnown RBP15.18■□□□□ 0.02
CNOT1-213ENST00000568158 APBA2Q99767 749 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 JMJD4Q9H9V9 463 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 RNF146Q9NTX7 359 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 CCPG1Q9ULG6 757 aa15.18■□□□□ 0.02
CNOT1-213ENST00000568158 HTTP42858 3142 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
CNOT1-213ENST00000568158 CCDC69A6NI79 296 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 EPB41L2O43491 1005 aaKnown RBP15.17■□□□□ 0.02
CNOT1-213ENST00000568158 DHX16O60231 1041 aaKnown RBP15.17■□□□□ 0.02
CNOT1-213ENST00000568158 HMGCRP04035 888 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 ICAM1P05362 532 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 EN2P19622 333 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-213ENST00000568158 RXRAP19793 462 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 LIFRP42702 1097 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 CACNB2Q08289 660 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-213ENST00000568158 SLC35G1Q2M3R5 365 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 ZNF792Q3KQV3 632 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 ZNF654Q8IZM8 581 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 ANKRD35Q8N283 1001 aa15.17■□□□□ 0.02
CNOT1-213ENST00000568158 CYP2C19P33261 490 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 TKFCQ3LXA3 575 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 TRMT44Q8IYL2 757 aaKnown RBP15.16■□□□□ 0.02
CNOT1-213ENST00000568158 MAML3Q96JK9 1138 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 ACAD9Q9H845 621 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 SLC5A4Q9NY91 659 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 FBXO40Q9UH90 709 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
CNOT1-213ENST00000568158 DNAJC25-GNG10A0A024R161 153 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 IGHA2P01877 340 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 HMGB1P09429 215 aaKnown RBP15.15■□□□□ 0.02
CNOT1-213ENST00000568158 CNTN2Q02246 1040 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 CDC37Q16543 378 aaPredicted RBP15.15■□□□□ 0.02
CNOT1-213ENST00000568158 QRICH1Q2TAL8 776 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 USH1GQ495M9 461 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 BLOC1S2Q6QNY1 142 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 Q6ZUG5 572 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 CCDC144CPQ8IYA2 1237 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
CNOT1-213ENST00000568158 BRPF3Q9ULD4 1205 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 RPTORQ8N122 1335 aa15.15■□□□□ 0.02
CNOT1-213ENST00000568158 KIAA0100Q14667 2235 aaKnown RBP15.15■□□□□ 0.02
CNOT1-213ENST00000568158 CENPFP49454 3210 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 CYTH3O43739 400 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 CASTP20810 708 aaKnown RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
CNOT1-213ENST00000568158 MAP3K21Q5TCX8 1036 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 MFSD14CQ5VZR4 134 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 OLFML2BQ68BL8 750 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 NSMFQ6X4W1 530 aa15.14■□□□□ 0.01
CNOT1-213ENST00000568158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms