RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 LACTBP83111 547 aaPredicted RBP20.92■□□□□ 0.94
COMMD4-222ENST00000568034 CDC37Q16543 378 aaPredicted RBP20.92■□□□□ 0.94
COMMD4-222ENST00000568034 ME3Q16798 604 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 LZTS2Q9BRK4 669 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 ARHGAP39Q9C0H5 1083 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 NCOA5Q9HCD5 579 aaKnown RBP20.92■□□□□ 0.94
COMMD4-222ENST00000568034 CNTNAP5Q8WYK1 1306 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 SMCHD1A6NHR9 2005 aa20.92■□□□□ 0.94
COMMD4-222ENST00000568034 PFKFB2O60825 505 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 FKTNO75072 461 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 STAT3P40763 770 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 CCT2P78371 535 aaKnown RBP20.91■□□□□ 0.94
COMMD4-222ENST00000568034 ST3GAL1Q11201 340 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 SCRN1Q12765 414 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 PPP2R5BQ15173 497 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 NTRK3Q16288 839 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 CCDC174Q6PII3 467 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 RIOX2Q8IUF8 465 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 CPXCR1Q8N123 301 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 AGBL1Q96MI9 1066 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 TEX13BQ9BXU2 312 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 EFCC1Q9HA90 598 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 VAT1LQ9HCJ6 419 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 RIPK3Q9Y572 518 aa20.91■□□□□ 0.94
COMMD4-222ENST00000568034 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
COMMD4-222ENST00000568034 ICAM1P05362 532 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 LBX1P52954 281 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 STK3Q13188 491 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 QRICH1Q2TAL8 776 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 SNRNP48Q6IEG0 339 aaKnown RBP20.9■□□□□ 0.94
COMMD4-222ENST00000568034 CD99L2Q8TCZ2 262 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 PIGSQ96S52 555 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 MGAMO43451 1857 aa20.9■□□□□ 0.94
COMMD4-222ENST00000568034 CASP8AP2Q9UKL3 1982 aa20.89■□□□□ 0.93
COMMD4-222ENST00000568034 PLS1Q14651 629 aa20.89■□□□□ 0.93
COMMD4-222ENST00000568034 SHCBP1Q8NEM2 672 aa20.89■□□□□ 0.93
COMMD4-222ENST00000568034 IL27Q8NEV9 243 aa20.89■□□□□ 0.93
COMMD4-222ENST00000568034 CCDC196A0A1B0GTZ2 297 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 ZBTB5O15062 677 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 DHX16O60231 1041 aaKnown RBP20.88■□□□□ 0.93
COMMD4-222ENST00000568034 ST18O60284 1047 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 ECM2O94769 699 aaPredicted RBP20.88■□□□□ 0.93
COMMD4-222ENST00000568034 ERCC3P19447 782 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 CCNA1P78396 465 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 IFFO2Q5TF58 517 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 CCDC82Q8N4S0 544 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 TRIM47Q96LD4 638 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 LIMCH1Q9UPQ0 1083 aa20.88■□□□□ 0.93
COMMD4-222ENST00000568034 DOCK3Q8IZD9 2030 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 MYH6P13533 1939 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 SLC25A27O95847 323 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 COL13A1Q5TAT6 717 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-222ENST00000568034 NECAB1Q8N987 351 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 GTF3C6Q969F1 213 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 ERO1AQ96HE7 468 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 SLKQ9H2G2 1235 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-222ENST00000568034 CCPG1Q9ULG6 757 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 CTDP1Q9Y5B0 961 aaPredicted RBP20.87■□□□□ 0.93
COMMD4-222ENST00000568034 PLXNB2O15031 1838 aa20.87■□□□□ 0.93
COMMD4-222ENST00000568034 PNMA6FA0A0J9YX94 578 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 hCG_1642624A0A1W2PR95 340 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 IFNAR1P17181 557 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 MAPK4P31152 587 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 PSMC4P43686 418 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.86■□□□□ 0.93
COMMD4-222ENST00000568034 GPR142Q7Z601 462 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 NCAPG2Q86XI2 1143 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 PIBF1Q8WXW3 757 aa20.86■□□□□ 0.93
COMMD4-222ENST00000568034 CTDNEP1O95476 244 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 COPB2P35606 906 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 FCGRTP55899 365 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 TKFCQ3LXA3 575 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 PHKBQ93100 1093 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 RRP36Q96EU6 259 aaKnown RBP20.85■□□□□ 0.93
COMMD4-222ENST00000568034 MROH8Q9H579 483 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 RNF146Q9NTX7 359 aa20.85■□□□□ 0.93
COMMD4-222ENST00000568034 ZNF236Q9UL36 1845 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 PPFIA3O75145 1194 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 ALAS1P13196 640 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 MUM1L1Q5H9M0 696 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 PLEKHH3Q7Z736 793 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 FBXO11Q86XK2 927 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 CHST13Q8NET6 341 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 CLEC4DQ8WXI8 215 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 ZSCAN31Q96LW9 406 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-222ENST00000568034 AMNQ9BXJ7 453 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 PNMA2Q9UL42 364 aa20.84■□□□□ 0.93
COMMD4-222ENST00000568034 V9GY48 417 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-222ENST00000568034 TNPO2O14787 897 aaKnown RBP20.83■□□□□ 0.93
COMMD4-222ENST00000568034 DTNBO60941 627 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 SLC4A3P48751 1232 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 GRB14Q14449 540 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 PKN1Q16512 942 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 USH1GQ495M9 461 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 TRERF1Q96PN7 1200 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 RNF26Q9BY78 433 aaPredicted RBP20.83■□□□□ 0.93
COMMD4-222ENST00000568034 HOMER2Q9NSB8 354 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 GJD2Q9UKL4 321 aa20.83■□□□□ 0.93
COMMD4-222ENST00000568034 NFIBO00712 420 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms