RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 KIAA0355O15063 1070 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 MCCP23508 829 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 ANKRD45Q5TZF3 282 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 PCSK9Q8NBP7 692 aaKnown RBP22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 VTI1AQ96AJ9 217 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 CHMP4CQ96CF2 233 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 GMCL1Q96IK5 515 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 TOX2Q96NM4 488 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 STX8Q9UNK0 236 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 PLIN4Q96Q06 1357 aa22.32■■□□□ 1.16
GTF3C1-207ENST00000567806 C6orf222P0C671 652 aaPredicted RBP22.31■■□□□ 1.16
GTF3C1-207ENST00000567806 CCDC144BQ3MJ40 725 aa22.31■■□□□ 1.16
GTF3C1-207ENST00000567806 ANKRD33Q7Z3H0 272 aa22.31■■□□□ 1.16
GTF3C1-207ENST00000567806 GLT1D1Q96MS3 346 aa22.31■■□□□ 1.16
GTF3C1-207ENST00000567806 GUCD1Q96NT3 240 aa22.31■■□□□ 1.16
GTF3C1-207ENST00000567806 ACAD9Q9H845 621 aa22.31■■□□□ 1.16
GTF3C1-207ENST00000567806 ITGB8P26012 769 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 SMAD3P84022 425 aaKnown RBP22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 CTDSPL2Q05D32 466 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 TKFCQ3LXA3 575 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 RCSD1Q6JBY9 416 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 CCDC129Q6ZRS4 1044 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 ARMCX2Q7L311 632 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 A0A0C4DFX4 3053 aa22.3■■□□□ 1.16
GTF3C1-207ENST00000567806 MYH4Q9Y623 1939 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 LTBP2Q14767 1821 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 CNTN2Q02246 1040 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 FPGSQ05932 587 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 FAAP100Q0VG06 881 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 GNASQ5JWF2 1037 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 CCSAPQ6IQ19 270 aaPredicted RBP22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 CCDC144CPQ8IYA2 1237 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 EVI5LQ96CN4 794 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 FGD4Q96M96 766 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 AGBL1Q96MI9 1066 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 SEMA6BQ9H3T3 888 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 INCENPQ9NQS7 918 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 RNF146Q9NTX7 359 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 ELP1O95163 1332 aa22.29■■□□□ 1.16
GTF3C1-207ENST00000567806 RANBP6O60518 1105 aaKnown RBP22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 PLA2G6O60733 806 aa22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 ASGR1P07306 291 aa22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 CST5P28325 142 aaPredicted RBP22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 GJA9P57773 515 aa22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 KCTD1Q719H9 257 aa22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 RNPC3Q96LT9 517 aaKnown RBP22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 TRERF1Q96PN7 1200 aa22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 LAMA2P24043 3122 aaKnown RBP22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 MROH7Q68CQ1 1323 aa22.28■■□□□ 1.16
GTF3C1-207ENST00000567806 MYADML2A6NDP7 307 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 ASB14A6NK59 587 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 ALAS1P13196 640 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 FAM133AQ8N9E0 248 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 CDX2Q99626 313 aaPredicted RBP22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 UPF3AQ9H1J1 476 aaKnown RBP22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 IL17RBQ9NRM6 502 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 MTMR7Q9Y216 660 aa22.27■■□□□ 1.16
GTF3C1-207ENST00000567806 TIMP1P01033 207 aa22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 EPHB4P54760 987 aa22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 RRP1P56182 461 aaKnown RBP22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 IRX5P78411 483 aaPredicted RBP22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 TNFAIP2Q03169 654 aa22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 A1CFQ9NQ94 594 aaKnown RBP22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 HELLSQ9NRZ9 838 aa22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 ANAPC4Q9UJX5 808 aa22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 ZNF536O15090 1300 aa22.26■■□□□ 1.15
GTF3C1-207ENST00000567806 ADCY6O43306 1168 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 NMT2O60551 498 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 CDK7P50613 346 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 SNAP25P60880 206 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 VPS53Q5VIR6 699 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 TOMM22Q9NS69 142 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 PRR12Q9ULL5 1215 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 SALL3Q9BXA9 1300 aa22.25■■□□□ 1.15
GTF3C1-207ENST00000567806 A0A0U1RQG5 324 aaPredicted RBP22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 SOWAHBA6NEL2 793 aa22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 ARVCFO00192 962 aa22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 FOXP2O15409 715 aa22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 ALX1Q15699 326 aa22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 CCDC96Q2M329 555 aa22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 KATNBL1Q9H079 304 aa22.24■■□□□ 1.15
GTF3C1-207ENST00000567806 TLR3O15455 904 aaKnown RBP22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 ORC4O43929 436 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 PDE1AP54750 535 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 MCMDC2Q4G0Z9 681 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 DCAF4Q8WV16 495 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 AP5M1Q9H0R1 490 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 TBX21Q9UL17 535 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 CCPG1Q9ULG6 757 aa22.23■■□□□ 1.15
GTF3C1-207ENST00000567806 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.22■■□□□ 1.15
GTF3C1-207ENST00000567806 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.22■■□□□ 1.15
GTF3C1-207ENST00000567806 CENPBP07199 599 aaPredicted RBP22.22■■□□□ 1.15
GTF3C1-207ENST00000567806 RRP12Q5JTH9 1297 aaKnown RBP22.22■■□□□ 1.15
GTF3C1-207ENST00000567806 MFSD5Q6N075 450 aa22.22■■□□□ 1.15
GTF3C1-207ENST00000567806 TTYH1Q9H313 450 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms