RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 ESR2Q92731 530 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 GDAP1L1Q96MZ0 367 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 NUP58Q9BVL2 599 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 CAPS2Q9BXY5 557 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 ZNF185O15231 689 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 EIF3HO15372 352 aaKnown RBP eCLIP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 EPB41P11171 864 aaKnown RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 SLC5A1P13866 664 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 CDK17Q00537 523 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 SEMA3FQ13275 785 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 CCDC70Q6NSX1 233 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 RASSF10A6NK89 507 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 ERLIN2O94905 339 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 PLEKHA8P1O95397 391 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 SKOR1P84550 965 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 C2orf54Q08AI8 447 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 KCNB1Q14721 858 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 MEX3CQ5U5Q3 659 aaKnown RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 ARL6IP4Q66PJ3 421 aaKnown RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 ENAHQ8N8S7 591 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 NOC3LQ8WTT2 800 aaKnown RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 NCAPGQ9BPX3 1015 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 NHEJ1Q9H9Q4 299 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-215ENST00000566843 ANKRD36CQ5JPF3 1778 aa17.54■□□□□ 0.4
COMMD4-215ENST00000566843 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
COMMD4-215ENST00000566843 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
COMMD4-215ENST00000566843 TRIM49BA6NDI0 452 aa17.53■□□□□ 0.4
COMMD4-215ENST00000566843 PRLRP16471 622 aa17.53■□□□□ 0.4
COMMD4-215ENST00000566843 LONP1P36776 959 aaKnown RBP17.53■□□□□ 0.4
COMMD4-215ENST00000566843 ZBED6P86452 979 aa17.53■□□□□ 0.4
COMMD4-215ENST00000566843 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
COMMD4-215ENST00000566843 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 A6NNZ2 444 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 PDE8AO60658 829 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 CALM1P0DP23 149 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 CALM2P0DP24 149 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 CALM3P0DP25 149 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 CHRM1P11229 460 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 IDEP14735 1019 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 PMS1P54277 932 aaKnown RBP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 HLFQ16534 295 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 TUBB8Q3ZCM7 444 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 CATIPQ7Z7H3 387 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 KAT2BQ92831 832 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 ZSCAN10Q96SZ4 725 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 TSGA10Q9BZW7 698 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 SNX12Q9UMY4 172 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 MAPK8IP1Q9UQF2 711 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 ZNF330Q9Y3S2 320 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 ATXN2Q99700 1313 aaKnown RBP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 OPA1O60313 960 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 VAV2P52735 878 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 TMTC3Q6ZXV5 915 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 SND1Q7KZF4 910 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 C4orf32Q8N8J7 132 aa17.52■□□□□ 0.4
COMMD4-215ENST00000566843 ZNHIT6Q9NWK9 470 aaKnown RBP17.52■□□□□ 0.4
COMMD4-215ENST00000566843 SHANK3Q9BYB0 1731 aa17.52■□□□□ 0.39
COMMD4-215ENST00000566843 CNTNAP5Q8WYK1 1306 aa17.52■□□□□ 0.39
COMMD4-215ENST00000566843 GPTP24298 496 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 TROAPQ12815 778 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 ALS2CLQ60I27 953 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 TTI2Q6NXR4 508 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 SECISBP2LQ93073 1101 aaKnown RBP17.51■□□□□ 0.39
COMMD4-215ENST00000566843 AGPAT5Q9NUQ2 364 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 EXOC1Q9NV70 894 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 SHTN1A0MZ66 631 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 KLRC4O43908 158 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 DDAH1O94760 285 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 IPO7O95373 1038 aaKnown RBP17.51■□□□□ 0.39
COMMD4-215ENST00000566843 TNFRSF8P28908 595 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 GNGT1P63211 74 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 FIGNQ5HY92 759 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 HELBQ8NG08 1087 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-215ENST00000566843 BCAS4Q8TDM0 211 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 MAGEC2Q9UBF1 373 aaPredicted RBP17.51■□□□□ 0.39
COMMD4-215ENST00000566843 USP21Q9UK80 565 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 DUOX1Q9NRD9 1551 aa17.51■□□□□ 0.39
COMMD4-215ENST00000566843 A0A1W2PQJ5 194 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 MYL1P05976 194 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 KIF5AQ12840 1032 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 TRIM58Q8NG06 486 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 MYCBPQ99417 103 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-215ENST00000566843 JADE2Q9NQC1 790 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 DUSP10Q9Y6W6 482 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 RHOBTB3O94955 611 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 STAT6P42226 847 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 LIG3P49916 1009 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 IFIT1BQ5T764 474 aaKnown RBP17.5■□□□□ 0.39
COMMD4-215ENST00000566843 EMBQ6PCB8 327 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 GIMAP8Q8ND71 665 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-215ENST00000566843 CAVIN3Q969G5 261 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms