RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 POLR2DO15514 142 aaKnown RBP12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 SCG2P13521 617 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 KRT2P35908 639 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 NOVP48745 357 aa12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
PDXDC1-214ENST00000566633 MYH6P13533 1939 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 BMP6P22004 513 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 FANCCQ00597 558 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 MYL5Q02045 173 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 TPD52L1Q16890 204 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 NT5DC1Q5TFE4 455 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 CCDC17Q96LX7 622 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 HOOK1Q9UJC3 728 aaKnown RBP12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 TRIM75PA6NK02 468 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 ATP1A3P13637 1013 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 LMNB1P20700 586 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 EPS15P42566 896 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 ICA1Q05084 483 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 PFKFB3Q16875 520 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 RASGRP4Q8TDF6 673 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 TSC1Q92574 1164 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 NUP88Q99567 741 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 HACL1Q9UJ83 578 aa12.3□□□□□ -0.44
PDXDC1-214ENST00000566633 TNNT1P13805 278 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 ECE1P42892 770 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 SARSP49591 514 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 NLRP5P59047 1200 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 POSTNQ15063 836 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 NPY5RQ15761 445 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 CCDC96Q2M329 555 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 USP49Q70CQ1 688 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 TMC6Q7Z403 805 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 TNFRSF25Q93038 417 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 PIGSQ96S52 555 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 MAP7D2Q96T17 732 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 NT5C2P49902 561 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 KIF4BQ2VIQ3 1234 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 WWC2Q6AWC2 1192 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 ARMCX5Q6P1M9 558 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 PLIN4Q96Q06 1357 aa12.29□□□□□ -0.44
PDXDC1-214ENST00000566633 WNT7AO00755 349 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 RPS12P25398 132 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 GNAQP50148 359 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 ZYXQ15942 572 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 KANK3Q6NY19 840 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 DPF2Q92785 391 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 MAN1B1Q9UKM7 699 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 SNAP25P60880 206 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 TMEM179Q6ZVK1 233 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 ACER1Q8TDN7 264 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 FANCLQ9NW38 375 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
PDXDC1-214ENST00000566633 UBASH3AP57075 661 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 MORC3Q14149 939 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 DHX8Q14562 1220 aaKnown RBP12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 NYAP1Q6ZVC0 841 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 MTERF4Q7Z6M4 381 aaKnown RBP12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 CCAR2Q8N163 923 aaKnown RBP12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 PDILTQ8N807 584 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 SPATA20Q8TB22 786 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 GLIS2Q9BZE0 524 aaPredicted RBP12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 DEFB129Q9H1M3 183 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 BRMS1Q9HCU9 246 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 HERC5Q9UII4 1024 aaKnown RBP12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 PAXBP1Q9Y5B6 917 aa12.27□□□□□ -0.44
PDXDC1-214ENST00000566633 SIPA1L1O43166 1804 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 F5H6K3 240 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 H7C1D1 291 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 CTIFO43310 598 aaKnown RBP12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 BMP15O95972 392 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 SLC1A4P43007 532 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 KLRC3Q07444 240 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 ZNF543Q08ER8 600 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 NBPF12Q5TAG4 269 aaPredicted RBP12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
PDXDC1-214ENST00000566633 PIK3AP1Q6ZUJ8 805 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms