RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 MCCP23508 829 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 CTDSPL2Q05D32 466 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 ACVR2BQ13705 512 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBR1-206ENST00000566493 NUP133Q8WUM0 1156 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 STAG1Q8WVM7 1258 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 BADQ92934 168 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 LENG1Q96BZ8 264 aaPredicted RBP14.14□□□□□ -0.15
UBR1-206ENST00000566493 CHMP4CQ96CF2 233 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 ABHD16BQ9H3Z7 469 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 SPC25Q9HBM1 224 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 PDLIM7Q9NR12 457 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 HELLSQ9NRZ9 838 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.14□□□□□ -0.15
UBR1-206ENST00000566493 TACC3Q9Y6A5 838 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 SALL3Q9BXA9 1300 aa14.14□□□□□ -0.15
UBR1-206ENST00000566493 ADAMTS4O75173 837 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 DUSP11O75319 330 aaKnown RBP14.13□□□□□ -0.15
UBR1-206ENST00000566493 CLTBP09497 229 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 ACLYP53396 1101 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 PDE1AP54750 535 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
UBR1-206ENST00000566493 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 ACAD9Q9H845 621 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 MTMR10Q9NXD2 777 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 STXBP5LQ9Y2K9 1186 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 SYNRGQ9UMZ2 1314 aa14.13□□□□□ -0.15
UBR1-206ENST00000566493 TRIM43BA6NCK2 446 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 MOXD2PA6NHM9 499 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 POTEB2H3BUK9 544 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 PLA2G6O60733 806 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 PQBP1O60828 265 aaKnown RBP14.12□□□□□ -0.15
UBR1-206ENST00000566493 RAG1P15918 1043 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 SHHQ15465 462 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 TKFCQ3LXA3 575 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 VPS53Q5VIR6 699 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 FAM109BQ6ICB4 259 aaPredicted RBP14.12□□□□□ -0.15
UBR1-206ENST00000566493 KCTD1Q719H9 257 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 SH3RF1Q7Z6J0 888 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 PCSK9Q8NBP7 692 aaKnown RBP14.12□□□□□ -0.15
UBR1-206ENST00000566493 TRIM43Q96BQ3 446 aaPredicted RBP14.12□□□□□ -0.15
UBR1-206ENST00000566493 INCENPQ9NQS7 918 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 TOMM22Q9NS69 142 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 RNF146Q9NTX7 359 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 TMEM39AQ9NV64 488 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
UBR1-206ENST00000566493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.12□□□□□ -0.15
UBR1-206ENST00000566493 DCDC2CA8MYV0 355 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 C6orf222P0C671 652 aaPredicted RBP14.11□□□□□ -0.15
UBR1-206ENST00000566493 ALAS1P13196 640 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 ALX1Q15699 326 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 KCNA10Q16322 511 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 MCMDC2Q4G0Z9 681 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 RRP12Q5JTH9 1297 aaKnown RBP14.11□□□□□ -0.15
UBR1-206ENST00000566493 CCDC174Q6PII3 467 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 ARMCX2Q7L311 632 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 CCDC144CPQ8IYA2 1237 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 KLHDC9Q8NEP7 349 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 VTI1AQ96AJ9 217 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 AGBL1Q96MI9 1066 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 GLT1D1Q96MS3 346 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 TRERF1Q96PN7 1200 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 IL17RBQ9NRM6 502 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 MTMR7Q9Y216 660 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 MCM3APO60318 1980 aa14.11□□□□□ -0.15
UBR1-206ENST00000566493 ASB14A6NK59 587 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 KIAA0355O15063 1070 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 FOXP2O15409 715 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 ORC4O43929 436 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 NMT2O60551 498 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 AAMPQ13685 434 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 CCDC96Q2M329 555 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 C9orf50Q5SZB4 431 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 ZNF697Q5TEC3 545 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 NOL8Q76FK4 1167 aaKnown RBP14.1□□□□□ -0.15
UBR1-206ENST00000566493 DCAF4Q8WV16 495 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 TOX2Q96NM4 488 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 A1CFQ9NQ94 594 aaKnown RBP14.1□□□□□ -0.15
UBR1-206ENST00000566493 PRR12Q9ULL5 1215 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 ZNF536O15090 1300 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 MROH7Q68CQ1 1323 aa14.1□□□□□ -0.15
UBR1-206ENST00000566493 FGAP02671 866 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 CST5P28325 142 aaPredicted RBP14.09□□□□□ -0.15
UBR1-206ENST00000566493 GJA9P57773 515 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 CNTN2Q02246 1040 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 GNASQ5JWF2 1037 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 ANKRD33Q7Z3H0 272 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 RILPL2Q969X0 211 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 FAM227BQ96M60 508 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 FGD4Q96M96 766 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 LNPKQ9C0E8 428 aa14.09□□□□□ -0.15
UBR1-206ENST00000566493 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
UBR1-206ENST00000566493 CCPG1Q9ULG6 757 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms