RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 PCSK9Q8NBP7 692 aaKnown RBP19.63■□□□□ 0.73
TSR3-202ENST00000566296 GLT1D1Q96MS3 346 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 TOX2Q96NM4 488 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 ITGB8P26012 769 aa19.62■□□□□ 0.73
TSR3-202ENST00000566296 CST5P28325 142 aaPredicted RBP19.62■□□□□ 0.73
TSR3-202ENST00000566296 TFAP4Q01664 338 aa19.62■□□□□ 0.73
TSR3-202ENST00000566296 KCNA10Q16322 511 aa19.62■□□□□ 0.73
TSR3-202ENST00000566296 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
TSR3-202ENST00000566296 SEC62Q99442 399 aaKnown RBP19.62■□□□□ 0.73
TSR3-202ENST00000566296 ACAD9Q9H845 621 aa19.62■□□□□ 0.73
TSR3-202ENST00000566296 ELP1O95163 1332 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 MYADML2A6NDP7 307 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 TMEM232C9JQI7 657 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 SLC1A4P43007 532 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 ZMYM1Q5SVZ6 1142 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 PI4K2BQ8TCG2 481 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 CHURC1Q8WUH1 139 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 FGD4Q96M96 766 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 CDX2Q99626 313 aaPredicted RBP19.61■□□□□ 0.73
TSR3-202ENST00000566296 SEMA6BQ9H3T3 888 aa19.61■□□□□ 0.73
TSR3-202ENST00000566296 TMEM265A0A087WTH1 108 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 MX1P20591 662 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 FAAP100Q0VG06 881 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 CCDC144BQ3MJ40 725 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 VTI1AQ96AJ9 217 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 GMCL1Q96IK5 515 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 UPF3AQ9H1J1 476 aaKnown RBP19.6■□□□□ 0.73
TSR3-202ENST00000566296 RNF146Q9NTX7 359 aa19.6■□□□□ 0.73
TSR3-202ENST00000566296 ZBTB47Q9UFB7 747 aaPredicted RBP19.6■□□□□ 0.73
TSR3-202ENST00000566296 A0A0U1RQG5 324 aaPredicted RBP19.59■□□□□ 0.73
TSR3-202ENST00000566296 TSPY2A6NKD2 308 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 ASGR1P07306 291 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 EPHB4P54760 987 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 RRP1P56182 461 aaKnown RBP19.59■□□□□ 0.73
TSR3-202ENST00000566296 GJA9P57773 515 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 TKFCQ3LXA3 575 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 CCSAPQ6IQ19 270 aaPredicted RBP19.59■□□□□ 0.73
TSR3-202ENST00000566296 MAFAQ8NHW3 353 aaPredicted RBP19.59■□□□□ 0.73
TSR3-202ENST00000566296 STAG1Q8WVM7 1258 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 STX8Q9UNK0 236 aa19.59■□□□□ 0.73
TSR3-202ENST00000566296 CCDC174Q6PII3 467 aa19.58■□□□□ 0.72
TSR3-202ENST00000566296 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
TSR3-202ENST00000566296 OTUD7AQ8TE49 926 aaPredicted RBP19.58■□□□□ 0.72
TSR3-202ENST00000566296 MYLIPQ8WY64 445 aa19.58■□□□□ 0.72
TSR3-202ENST00000566296 TTYH1Q9H313 450 aaPredicted RBP19.58■□□□□ 0.72
TSR3-202ENST00000566296 TBX21Q9UL17 535 aa19.58■□□□□ 0.72
TSR3-202ENST00000566296 A0A0C4DFX4 3053 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 LRRC37A2A6NM11 1700 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 TLR3O15455 904 aaKnown RBP19.57■□□□□ 0.72
TSR3-202ENST00000566296 ADCY6O43306 1168 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 TIMP1P01033 207 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 FOSL2P15408 326 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 MCCP23508 829 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 PPIGQ13427 754 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSR3-202ENST00000566296 GNASQ5JWF2 1037 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 NOL8Q76FK4 1167 aaKnown RBP19.57■□□□□ 0.72
TSR3-202ENST00000566296 FAM133AQ8N9E0 248 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 A1CFQ9NQ94 594 aaKnown RBP19.57■□□□□ 0.72
TSR3-202ENST00000566296 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSR3-202ENST00000566296 PCDHB15Q9Y5E8 787 aa19.57■□□□□ 0.72
TSR3-202ENST00000566296 LAMA2P24043 3122 aaKnown RBP19.57■□□□□ 0.72
TSR3-202ENST00000566296 ASB14A6NK59 587 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 ARVCFO00192 962 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 PLA2G6O60733 806 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 ALAS1P13196 640 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 CNTN2Q02246 1040 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 CCDC129Q6ZRS4 1044 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 KCTD1Q719H9 257 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 CHMP4CQ96CF2 233 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 AGBL1Q96MI9 1066 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 TRERF1Q96PN7 1200 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 COL25A1Q9BXS0 654 aaPredicted RBP19.56■□□□□ 0.72
TSR3-202ENST00000566296 KATNBL1Q9H079 304 aa19.56■□□□□ 0.72
TSR3-202ENST00000566296 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
TSR3-202ENST00000566296 ZNF536O15090 1300 aa19.55■□□□□ 0.72
TSR3-202ENST00000566296 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.55■□□□□ 0.72
TSR3-202ENST00000566296 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.55■□□□□ 0.72
TSR3-202ENST00000566296 IRX5P78411 483 aaPredicted RBP19.55■□□□□ 0.72
TSR3-202ENST00000566296 TNFAIP2Q03169 654 aa19.55■□□□□ 0.72
TSR3-202ENST00000566296 CCDC96Q2M329 555 aa19.55■□□□□ 0.72
TSR3-202ENST00000566296 MFSD5Q6N075 450 aa19.55■□□□□ 0.72
TSR3-202ENST00000566296 MTMR7Q9Y216 660 aa19.55■□□□□ 0.72
TSR3-202ENST00000566296 RANBP6O60518 1105 aaKnown RBP19.54■□□□□ 0.72
TSR3-202ENST00000566296 DNAJB2P25686 324 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 CDK7P50613 346 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 CTDSPL2Q05D32 466 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 RCSD1Q6JBY9 416 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 TLK2Q86UE8 772 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 TMEM199Q8N511 208 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
TSR3-202ENST00000566296 UNC80Q8N2C7 3258 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 SOWAHBA6NEL2 793 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 ZEB2O60315 1214 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 PSRC1Q6PGN9 363 aaPredicted RBP19.53■□□□□ 0.72
TSR3-202ENST00000566296 FAM126BQ8IXS8 530 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 EVI5LQ96CN4 794 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.53■□□□□ 0.725e-9■□□□□ 10.9
TSR3-202ENST00000566296 PPP1R12CQ9BZL4 782 aa19.53■□□□□ 0.72
TSR3-202ENST00000566296 AP5M1Q9H0R1 490 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms