RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 COL19A1Q14993 1142 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SF3B3Q15393 1217 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 SMAD1Q15797 465 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 PTPN21Q16825 1174 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 METTL24Q5JXM2 366 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 NIM1KQ8IY84 436 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 SLFN12Q8IYM2 578 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 IFNL2Q8IZJ0 200 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 MSANTD4Q8NCY6 345 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 RNF217Q8TC41 542 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 AIDAQ96BJ3 306 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 NGRNQ9NPE2 291 aaKnown RBP3.53□□□□□ -1.84
CHD9-216ENST00000565803 ZFATQ9P243 1243 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CEP131Q9UPN4 1083 aa3.53□□□□□ -1.84
CHD9-216ENST00000565803 CPSF1Q10570 1443 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 NCAPD2Q15021 1401 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 TPM3P06753 285 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CFHP08603 1231 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SRGNP10124 158 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 GYS1P13807 737 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CAPN2P17655 700 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 EIF4BP23588 611 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 CTHP32929 405 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CHKAP35790 457 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 STT3AP46977 705 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 TPD52P55327 224 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 ELF2Q15723 593 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 HYIQ5T013 277 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 MICALL1Q8N3F8 863 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ARL6IP6Q8N6S5 226 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 POF1BQ8WVV4 589 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SLC7A3Q8WY07 619 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SH3KBP1Q96B97 665 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ELAC2Q9BQ52 826 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 PCGF6Q9BYE7 350 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ABCG4Q9H172 646 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ITM2BQ9Y287 266 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ANKRD26Q9UPS8 1709 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 PMM2O15305 246 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 VIL1P09327 827 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 MCM4P33991 863 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 RAB15P59190 212 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CLDN10P78369 228 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 RASA3Q14644 834 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SAFBQ15424 915 aaKnown RBP eCLIP3.52□□□□□ -1.85
CHD9-216ENST00000565803 TAF12Q16514 161 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ZC3H12BQ5HYM0 836 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 TSHZ3Q63HK5 1081 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 RASGRP2Q7LDG7 609 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 RETREG3Q86VR2 466 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 DGKHQ86XP1 1220 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 TRIM50Q86XT4 487 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 TSEN2Q8NCE0 465 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 PI4K2BQ8TCG2 481 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SYAP1Q96A49 352 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 SPAG5Q96R06 1193 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SDF4Q9BRK5 362 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 BRD9Q9H8M2 597 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 PRDM6Q9NQX0 595 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 ACAD8Q9UKU7 415 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 LTN1O94822 1766 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 TRIM75PA6NK02 468 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 RASA4O43374 803 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 KIF1CO43896 1103 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 B3GALNT1O75752 331 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 MCM2P49736 904 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ZNF132P52740 706 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 GTF2IP78347 998 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 AKAP17AQ02040 695 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 SQSTM1Q13501 440 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 PIN1Q13526 163 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 KIAA0907Q7Z7F0 614 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 MRPL50Q8N5N7 158 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 NGEFQ8N5V2 710 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CELF2-AS1Q8N7Q2 184 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 APOL5Q9BWW9 433 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 CAAP1Q9H8G2 361 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 PDRG1Q9NUG6 133 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 KBTBD4Q9NVX7 518 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 SCHIP1Q9P0W5 487 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 CDV3Q9UKY7 258 aaKnown RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 KIAA1024Q9UPX6 916 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 FRMPD2Q68DX3 1309 aaPredicted RBP3.52□□□□□ -1.85
CHD9-216ENST00000565803 PRR36Q9H6K5 1346 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 ANKRD36BQ8N2N9 1353 aa3.52□□□□□ -1.85
CHD9-216ENST00000565803 H0YC42 278 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 SMAD7O15105 426 aaKnown RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 PDPK1O15530 556 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 NCAM1P13591 858 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 DESP17661 470 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 GBP2P32456 591 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 KRT9P35527 623 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 SLC4A3P48751 1232 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 FAPQ12884 760 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 FKBP5Q13451 457 aaPredicted RBP3.51□□□□□ -1.85
CHD9-216ENST00000565803 CLUL1Q15846 466 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 PARP10Q53GL7 1025 aa3.51□□□□□ -1.85
CHD9-216ENST00000565803 HSP90B2PQ58FF3 399 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms