RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CFAP45Q9UL16 551 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 SSC5DA1L4H1 1573 aa10.76□□□□□ -0.69
CNEP1R1-206ENST00000565556 hCG_1642624A0A1W2PR95 340 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 USP2O75604 605 aaPredicted RBP10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 ECE1P42892 770 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 IREB2P48200 963 aaKnown RBP10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZNF75DP51815 510 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 USP14P54578 494 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 SLC35G1Q2M3R5 365 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 KCTD1Q719H9 257 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 RASGRP2Q7LDG7 609 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 ADGRF4Q8IZF3 695 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 LPAR1Q92633 364 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 FEZ1Q99689 392 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 KIAA1683Q9H0B3 1180 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 CBX8Q9HC52 389 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 VAT1LQ9HCJ6 419 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 GJB4Q9NTQ9 266 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 BARHL2Q9NY43 387 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 DACT1Q9NYF0 836 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 VPS54Q9P1Q0 977 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 PNMA6FA0A0J9YX94 578 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 USP17L10C9JJH3 530 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 PLA2G6O60733 806 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 CDC25BP30305 580 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 NLRP5P59047 1200 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 ANO6Q4KMQ2 910 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 TTBK2Q6IQ55 1244 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 BTNL9Q6UXG8 535 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 DIS3L2Q8IYB7 885 aaKnown RBP10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 CHURC1Q8WUH1 139 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 LEO1Q8WVC0 666 aaPredicted RBP10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 MTMR8Q96EF0 704 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 CDCA5Q96FF9 252 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 PIGSQ96S52 555 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 GTPBP4Q9BZE4 634 aaKnown RBP10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 JMJD4Q9H9V9 463 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 PRDM10Q9NQV6 1147 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 KCNJ14Q9UNX9 436 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
CNEP1R1-206ENST00000565556 SRCAPQ6ZRS2 3230 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 SMTNL1A8MU46 457 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 TMEM232C9JQI7 657 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZBTB5O15062 677 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 PTPRAP18433 802 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 KRT2P35908 639 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 TRAF1Q13077 416 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 IKQ13123 557 aaPredicted RBP10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 CAMK4Q16566 473 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 HEATR3Q7Z4Q2 680 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 FAM160B2Q86V87 743 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 PLA2G4DQ86XP0 818 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 HOMER1Q86YM7 354 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 NOSTRINQ8IVI9 506 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 DRC7Q8IY82 874 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZKSCAN4Q969J2 545 aaPredicted RBP10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 TRIM5Q9C035 493 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 CPVLQ9H3G5 476 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 CSADQ9Y600 493 aa10.74□□□□□ -0.69
CNEP1R1-206ENST00000565556 BTBD18B2RXH4 712 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 C19orf81C9J6K1 198 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 STXBP3O00186 592 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 WDR46O15213 610 aaKnown RBP10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 SLC16A2P36021 539 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 STAT2P52630 851 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 SYDE2Q5VT97 1194 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 WWC2Q6AWC2 1192 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 PPP1R18Q6NYC8 613 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 SPICE1Q8N0Z3 855 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZNF280CQ8ND82 737 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 BICD2Q8TD16 824 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 NUP88Q99567 741 aaPredicted RBP10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 RRAGCQ9HB90 399 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 FEM1BQ9UK73 627 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 PHIPQ8WWQ0 1821 aa10.73□□□□□ -0.69
CNEP1R1-206ENST00000565556 ESYT2A0FGR8 921 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 GNA11P29992 359 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 NAPAP54920 295 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 BACE1P56817 501 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZYXQ15942 572 aaKnown RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 FAM173BQ6P4H8 233 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 CCDC186Q7Z3E2 898 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 ARMC9Q7Z3E5 817 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 LDHDQ86WU2 507 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 CKAP2LQ8IYA6 745 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 GLIS2Q9BZE0 524 aaPredicted RBP10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 C6orf50Q9HD87 102 aa10.72□□□□□ -0.69
CNEP1R1-206ENST00000565556 PCDHA4Q9UN74 947 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms